RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 MBD6Q96DN6 1003 aa24.54■■□□□ 1.52
USP42-204ENST00000451154 CCDC126Q96EE4 140 aa24.54■■□□□ 1.52
USP42-204ENST00000451154 ALPK1Q96QP1 1244 aa24.54■■□□□ 1.52
USP42-204ENST00000451154 SHCBP1LQ9BZQ2 653 aa24.54■■□□□ 1.52
USP42-204ENST00000451154 ACBD3Q9H3P7 528 aa24.54■■□□□ 1.52
USP42-204ENST00000451154 PIGMQ9H3S5 423 aa24.54■■□□□ 1.52
USP42-204ENST00000451154 GLIPR2Q9H4G4 154 aa24.54■■□□□ 1.52
USP42-204ENST00000451154 TNFRSF12AQ9NP84 129 aa24.54■■□□□ 1.52
USP42-204ENST00000451154 MIEF1Q9NQG6 463 aa24.54■■□□□ 1.52
USP42-204ENST00000451154 TAS2R7Q9NYW3 318 aa24.54■■□□□ 1.52
USP42-204ENST00000451154 MED11Q9P086 117 aa24.54■■□□□ 1.52
USP42-204ENST00000451154 C19orf53Q9UNZ5 99 aaPredicted RBP24.54■■□□□ 1.52
USP42-204ENST00000451154 A0A087WV62 115 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 UPK1AO00322 258 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 FADS1O60427 444 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 RAF1P04049 648 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 FOXD4Q12950 439 aaPredicted RBP24.53■■□□□ 1.52
USP42-204ENST00000451154 KEAP1Q14145 624 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 BCL2A1Q16548 175 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 CYP27C1Q4G0S4 372 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 CHMP1BQ7LBR1 199 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 TRIM46Q7Z4K8 759 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 P4HA3Q7Z4N8 544 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 CAMKMTQ7Z624 323 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 UBQLNLQ8IYU4 475 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 CEP112Q8N8E3 955 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 FADS6Q8N9I5 356 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 OR2M3Q8NG83 312 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 DACH2Q96NX9 599 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 RTN4RQ9BZR6 473 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 MYNNQ9NPC7 610 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 GRID1Q9ULK0 1009 aa24.53■■□□□ 1.52
USP42-204ENST00000451154 TNFSF12-TNFSF13A0A0A6YY99 330 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 A0A1W2PNV4 684 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 SH3D21A4FU49 640 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 A8MXE2 369 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 CRCPO75575 148 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 TNFSF13O75888 250 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 ATE1O95260 518 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 HK1P19367 917 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 STX5Q13190 355 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 NOXRED1Q6NXP6 359 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 SH2D5Q6ZV89 423 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 KIF18AQ8NI77 898 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 ELP4Q96EB1 424 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 AMDHD1Q96NU7 426 aa24.52■■□□□ 1.52
USP42-204ENST00000451154 HCRTR2O43614 444 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 PROCP04070 461 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 HRGP04196 525 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 NTSP30990 170 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 DIO3P55073 304 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 CLDN15P56746 228 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 EEF1A1P68104 462 aaKnown RBP24.51■■□□□ 1.51
USP42-204ENST00000451154 ADAM8P78325 824 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 CFAP157Q5JU67 520 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 EEF1A1P5Q5VTE0 462 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 FRMD7Q6ZUT3 714 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 GSPT2Q8IYD1 628 aaKnown RBP24.51■■□□□ 1.51
USP42-204ENST00000451154 OR2L13Q8N349 312 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 OR5M1Q8NGP8 315 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 DUSP19Q8WTR2 217 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 EGLN2Q96KS0 407 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 C12orf65Q9H3J6 166 aaKnown RBP24.51■■□□□ 1.51
USP42-204ENST00000451154 DDX18Q9NVP1 670 aaKnown RBP24.51■■□□□ 1.51
USP42-204ENST00000451154 PACSIN3Q9UKS6 424 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 ZNF337Q9Y3M9 751 aa24.51■■□□□ 1.51
USP42-204ENST00000451154 H0YC42 278 aa24.5■■□□□ 1.51
USP42-204ENST00000451154 GLRA3O75311 464 aa24.5■■□□□ 1.51
USP42-204ENST00000451154 PEPDP12955 493 aa24.5■■□□□ 1.51
USP42-204ENST00000451154 RFX3P48380 749 aa24.5■■□□□ 1.51
USP42-204ENST00000451154 TPD52P55327 224 aaPredicted RBP24.5■■□□□ 1.51
USP42-204ENST00000451154 DECR1Q16698 335 aa24.5■■□□□ 1.51
USP42-204ENST00000451154 MARCH3Q86UD3 253 aa24.5■■□□□ 1.51
USP42-204ENST00000451154 FAM76AQ8TAV0 307 aa24.5■■□□□ 1.51
USP42-204ENST00000451154 STARD4Q96DR4 205 aa24.5■■□□□ 1.51
USP42-204ENST00000451154 RRAGDQ9NQL2 400 aaPredicted RBP24.5■■□□□ 1.51
USP42-204ENST00000451154 SDHAF3Q9NRP4 125 aa24.5■■□□□ 1.51
USP42-204ENST00000451154 WBP11Q9Y2W2 641 aaKnown RBP24.5■■□□□ 1.51
USP42-204ENST00000451154 A0A1W2PPR1 153 aa24.49■■□□□ 1.51
USP42-204ENST00000451154 SLC22A20A6NK97 555 aa24.49■■□□□ 1.51
USP42-204ENST00000451154 CASKO14936 926 aa24.49■■□□□ 1.51
USP42-204ENST00000451154 SMNDC1O75940 238 aaKnown RBP eCLIP24.49■■□□□ 1.511e-6■■■■□ 23.6
USP42-204ENST00000451154 SLITRK5O94991 958 aa24.49■■□□□ 1.51
USP42-204ENST00000451154 PSMG1O95456 288 aa24.49■■□□□ 1.51
USP42-204ENST00000451154 SHBGP04278 402 aa24.49■■□□□ 1.51
USP42-204ENST00000451154 CPOXP36551 454 aa24.49■■□□□ 1.51
USP42-204ENST00000451154 SUCLG1P53597 346 aaKnown RBP24.49■■□□□ 1.51
USP42-204ENST00000451154 FAM27E3Q08E93 113 aa24.49■■□□□ 1.51
USP42-204ENST00000451154 DEFB113Q30KQ7 82 aa24.49■■□□□ 1.51
USP42-204ENST00000451154 RAET1LQ5VY80 246 aa24.49■■□□□ 1.51
USP42-204ENST00000451154 CNEP1R1Q8N9A8 125 aa24.49■■□□□ 1.51
USP42-204ENST00000451154 Q9N2J8 555 aa24.49■■□□□ 1.51
USP42-204ENST00000451154 CCL27Q9Y4X3 112 aa24.49■■□□□ 1.51
USP42-204ENST00000451154 KIF2AO00139 706 aaPredicted RBP24.48■■□□□ 1.51
USP42-204ENST00000451154 PLIN3O60664 434 aa24.48■■□□□ 1.51
USP42-204ENST00000451154 SEC22BO75396 215 aa24.48■■□□□ 1.51
USP42-204ENST00000451154 RSL1D1O76021 490 aaKnown RBP24.48■■□□□ 1.51
USP42-204ENST00000451154 GOSR1O95249 250 aa24.48■■□□□ 1.51
USP42-204ENST00000451154 IL33O95760 270 aa24.48■■□□□ 1.51
USP42-204ENST00000451154 GABRA3P34903 492 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms