RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 KCNJ2P63252 427 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 LIPEQ05469 1076 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 BNIP2Q12982 314 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 NADK2Q4G0N4 442 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 RABL3Q5HYI8 236 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 COLEC12Q5KU26 742 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 COX20Q5RI15 118 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 DDX59Q5T1V6 619 aaKnown RBP eCLIP12□□□□□ -0.49
VPS33A-202ENST00000451053 DESI1Q6ICB0 168 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 SPINK14Q6IE38 97 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 TNFAIP8L2Q6P589 184 aaPredicted RBP12□□□□□ -0.49
VPS33A-202ENST00000451053 PGM2L1Q6PCE3 622 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 ZCCHC12Q6PEW1 402 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 SERPINA11Q86U17 422 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 GPALPP1Q8IXQ4 340 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 CYP4Z2PQ8N1L4 340 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 HORMAD2Q8N7B1 307 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 BCORP1Q8N888 145 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 OR52N2Q8NGI0 321 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 OR5M3Q8NGP4 307 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 MIPOL1Q8TD10 442 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 CDS1Q92903 461 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 RMND5BQ96G75 393 aaPredicted RBP12□□□□□ -0.49
VPS33A-202ENST00000451053 SLC35A4Q96G79 324 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 OR7D2Q96RA2 312 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 STACQ99469 402 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 KCTD14Q9BQ13 255 aaPredicted RBP12□□□□□ -0.49
VPS33A-202ENST00000451053 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12□□□□□ -0.49
VPS33A-202ENST00000451053 OR51I1Q9H343 314 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 MUC13Q9H3R2 512 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 PIGUQ9H490 435 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 KAT8Q9H7Z6 458 aaKnown RBP12□□□□□ -0.49
VPS33A-202ENST00000451053 Q9N2J8 555 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 HPF1Q9NWY4 346 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 THUMPD1Q9NXG2 353 aaKnown RBP12□□□□□ -0.49
VPS33A-202ENST00000451053 LRFN1Q9P244 771 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 SUCOQ9UBS9 1254 aaKnown RBP12□□□□□ -0.49
VPS33A-202ENST00000451053 CBLCQ9ULV8 474 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 CACNA1BQ00975 2339 aa12□□□□□ -0.49
VPS33A-202ENST00000451053 FAM220BPB1ANY3 271 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 GMNNO75496 209 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 REM1O75628 298 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 PPM1BO75688 479 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 SOX30O94993 753 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 IGKV1D-16P01601 117 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 OR12D1P0DN82 309 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 SFTPCP11686 197 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 KHKP50053 298 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 MRPS22P82650 360 aaKnown RBP11.99□□□□□ -0.49
VPS33A-202ENST00000451053 CEACAM7Q14002 265 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 NTRK2Q16620 822 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 CYP51A1Q16850 503 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 CYP27C1Q4G0S4 372 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 ERICH5Q6P6B1 374 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 Q6ZS92 163 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 MDGA2Q7Z553 956 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 GALNT10Q86SR1 603 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 HPS6Q86YV9 775 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 COX18Q8N8Q8 333 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 FAM13CQ8NE31 585 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 OR2T12Q8NG77 320 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 OR10G3Q8NGC4 313 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 ADAMTS15Q8TE58 950 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 RAB8BQ92930 207 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 EFHD2Q96C19 240 aaPredicted RBP11.99□□□□□ -0.49
VPS33A-202ENST00000451053 HES7Q9BYE0 225 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 TRIM8Q9BZR9 551 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 IKZF5Q9H5V7 419 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 DUSP22Q9NRW4 184 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 GIN1Q9NXP7 522 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 CD300AQ9UGN4 299 aa11.99□□□□□ -0.49
VPS33A-202ENST00000451053 DSPP15924 2871 aaKnown RBP11.98□□□□□ -0.49
VPS33A-202ENST00000451053 TMEM247A6NEH6 219 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 PRORSD1PA6NEY8 169 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 ANKRD65E5RJM6 399 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 H0YHG0 523 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 HMGN4O00479 90 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 CDK2AP1O14519 115 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 TSPAN2O60636 221 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 UGT2B11O75310 529 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 SLC25A12O75746 678 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 PDE5AO76074 875 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 KCNK2O95069 426 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 AGR2O95994 175 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 CCL3P10147 92 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 NAGAP17050 411 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 HTR1EP28566 365 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 PIGAP37287 484 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 CRATP43155 626 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 RFX3P48380 749 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 TMED10P49755 219 aaKnown RBP11.98□□□□□ -0.49
VPS33A-202ENST00000451053 GSK3BP49841 420 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 PSPHP78330 225 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 POU6F2P78424 691 aaPredicted RBP11.98□□□□□ -0.49
VPS33A-202ENST00000451053 DMTNQ08495 405 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 SELPLGQ14242 412 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 RGNQ15493 299 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 DECR1Q16698 335 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 CCNJQ5T5M9 372 aa11.98□□□□□ -0.49
VPS33A-202ENST00000451053 SLC6A19Q695T7 634 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms