RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PHC1P78364 1004 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 HSPB3Q12988 150 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 ART3Q13508 389 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 CDSNQ15517 529 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 PRSS53Q2L4Q9 553 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 C6orf10Q5SRN2 563 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 FAM180BQ6P0A1 224 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 LYPD8Q6UX82 237 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 RPTNQ6XPR3 784 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 SLC29A4Q7RTT9 530 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 POU5F2Q8N7G0 328 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 OR4A15Q8NGL6 344 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 SLC22A8Q8TCC7 542 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 UTP4Q969X6 686 aaKnown RBP15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 CCDC115Q96NT0 180 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 FAM173AQ9BQD7 235 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 TTTY12Q9BZ98 90 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 C3orf14Q9HBI5 128 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 SACM1LQ9NTJ5 587 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 TAS2R9Q9NYW1 312 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 TAS2R1Q9NYW7 299 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 HRH3Q9Y5N1 445 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 NINQ8N4C6 2090 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 DNAJC13O75165 2243 aa15.67■□□□□ 0.1
PRPF40A-204ENST00000450303 TEX15Q9BXT5 2789 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 ITPR2Q14571 2701 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 ADAM10O14672 748 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 MRASO14807 208 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 SCN2BO60939 215 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 ERN1O75460 977 aaKnown RBP15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 NPPAP01160 153 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 ABCB1P08183 1280 aaPredicted RBP15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 IFI6P09912 130 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 HTR1EP28566 365 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 SMSP52788 366 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 NFYCQ13952 458 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 ZNF791Q3KP31 576 aaPredicted RBP15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 PRAMEF20Q5VT98 475 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 REP15Q6BDI9 236 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 SLC2A7Q6PXP3 512 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 TMEM64Q6YI46 380 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 BNC2Q6ZN30 1099 aaPredicted RBP15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 CD163Q86VB7 1156 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 ANKRD46Q86W74 232 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 GOLM1Q8NBJ4 401 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 OR5M3Q8NGP4 307 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 FAM57AQ8TBR7 257 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 ZNF675Q8TD23 568 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 STMN2Q93045 179 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 MARVELD3Q96A59 401 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 MOAP1Q96BY2 351 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 SGCZQ96LD1 299 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 WWTR1Q9GZV5 400 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 CXorf21Q9HAI6 301 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 SLC52A3Q9NQ40 469 aa15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 TUBA8Q9NY65 449 aaPredicted RBP15.66■□□□□ 0.1
PRPF40A-204ENST00000450303 NCKAP5O14513 1909 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 A0A096LPI6 279 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 ACOT7O00154 380 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 AIM2O14862 343 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 BCAS2O75934 225 aaPredicted RBP15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 EFNA1P20827 205 aaPredicted RBP15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 MAGEA5P43359 124 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 MAP4K2Q12851 820 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 EBPQ15125 230 aaKnown RBP15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 SPDYE7PQ495Y7 208 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 SLC22A10Q63ZE4 541 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 BHLHB9Q6PI77 547 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 XKRXQ6PP77 449 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 ZNF621Q6ZSS3 439 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 ZNF551Q7Z340 670 aaPredicted RBP15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 GALNT12Q8IXK2 581 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 CLECL1Q8IZS7 167 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 SLC34A3Q8N130 599 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 DPP10Q8N608 796 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 TMEM251Q8N6I4 163 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 OR9A2Q8NGT5 310 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 GOT1L1Q8NHS2 421 aaPredicted RBP15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 GTF2H4Q92759 462 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 ROPN1LQ96C74 230 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 RCN3Q96D15 328 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 SPACA9Q96E40 222 aaPredicted RBP15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 NDE1Q9NXR1 346 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 KLF2Q9Y5W3 355 aaPredicted RBP15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 SNX8Q9Y5X2 465 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 LIPGQ9Y5X9 500 aa15.65■□□□□ 0.1
PRPF40A-204ENST00000450303 C2orf92A0A1B0GVN3 265 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 NPIPA2E9PIF3 369 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 NPIPA3F8WFD2 350 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 PLOD2O00469 737 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 FBP2O00757 339 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 HNRNPRO43390 633 aaKnown RBP15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 GLSO94925 669 aaPredicted RBP15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 CELA3AP09093 270 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 ZCCHC18P0CG32 403 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 UQCRC2P22695 453 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 SOAT1P35610 550 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 CPA2P48052 419 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 HBA1P69905 142 aa15.64■□□□□ 0.09
PRPF40A-204ENST00000450303 PRR5P85299 388 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms