RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 PNO1Q9NRX1 252 aaKnown RBP13.24□□□□□ -0.29
USP39-207ENST00000450066 KLHL28Q9NXS3 571 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 RHCGQ9UBD6 479 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 CTSFQ9UBX1 484 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 PRODH2Q9UF12 536 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 MKL2Q9ULH7 1088 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 ZNF443Q9Y2A4 671 aaPredicted RBP13.24□□□□□ -0.29
USP39-207ENST00000450066 DTX4Q9Y2E6 619 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 CHST2Q9Y4C5 530 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 CLCA3PQ9Y6N3 262 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 ARRDC5A6NEK1 342 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 SLC16A6O15403 523 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 CLIC3O95833 236 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 CLPSP04118 112 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 DBIP07108 87 aaKnown RBP13.24□□□□□ -0.29
USP39-207ENST00000450066 ZNF806P0C7X5 589 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 ANXA8P13928 327 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 CDH2P19022 906 aaPredicted RBP13.24□□□□□ -0.29
USP39-207ENST00000450066 EFNA3P52797 238 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 DCDP81605 110 aaKnown RBP13.24□□□□□ -0.29
USP39-207ENST00000450066 FIGNL1Q6PIW4 674 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 PLPP5Q8NEB5 264 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 OR10G2Q8NGC3 310 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 RMND5BQ96G75 393 aaPredicted RBP13.24□□□□□ -0.29
USP39-207ENST00000450066 ALPK1Q96QP1 1244 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 FEVQ99581 238 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 KRT84Q9NSB2 600 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 FBXO34Q9NWN3 711 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 A4GNTQ9UNA3 340 aa13.24□□□□□ -0.29
USP39-207ENST00000450066 FER1L5A0AVI2 2057 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 EFCAB7A8K855 629 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 CDX4O14627 284 aaPredicted RBP13.23□□□□□ -0.29
USP39-207ENST00000450066 PCDH17O14917 1159 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 MITFO75030 526 aaPredicted RBP13.23□□□□□ -0.29
USP39-207ENST00000450066 H1F0P07305 194 aaKnown RBP13.23□□□□□ -0.29
USP39-207ENST00000450066 CT45A8P0DMV1 189 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 CT45A9P0DMV2 189 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 ITGAMP11215 1152 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 TRHRP34981 398 aaPredicted RBP13.23□□□□□ -0.29
USP39-207ENST00000450066 PIGAP37287 484 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 SLC37A1P57057 533 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 OCA2Q04671 838 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 CT45A2Q5DJT8 189 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 GALNT5Q7Z7M9 940 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 LAPTM4BQ86VI4 370 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 TAGAPQ8N103 731 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 CLIP4Q8N3C7 705 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 SLC5A8Q8N695 610 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 BMPERQ8N8U9 685 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 STT3BQ8TCJ2 826 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 NR4A3Q92570 626 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 MUS81Q96NY9 551 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 ZNF696Q9H7X3 374 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 APMAPQ9HDC9 416 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 Q9N2J8 555 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 HCN4Q9Y3Q4 1203 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 NINQ8N4C6 2090 aa13.23□□□□□ -0.29
USP39-207ENST00000450066 LOC100130705A0A1B0GUX0 176 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 A0A1W2PRQ8 180 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 UGT2B17O75795 530 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 CCNB2O95067 398 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 IGKV3-11P04433 115 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 ZGLP1P0C6A0 271 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 CD59P13987 128 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 FUT4P22083 530 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 EEF1A1P68104 462 aaKnown RBP13.22□□□□□ -0.29
USP39-207ENST00000450066 PIN1Q13526 163 aaPredicted RBP13.22□□□□□ -0.29
USP39-207ENST00000450066 DGCR6Q14129 220 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 NPTX1Q15818 432 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 MAPK14Q16539 360 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 LIN52Q52LA3 116 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 EIPR1Q53HC9 387 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 ZNF385CQ66K41 422 aaPredicted RBP13.22□□□□□ -0.29
USP39-207ENST00000450066 NPSR1Q6W5P4 371 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 PRSS58Q8IYP2 241 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 OFCC1Q8IZS5 231 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 OR14A16Q8NHC5 309 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 DAZLQ92904 295 aaKnown RBP13.22□□□□□ -0.29
USP39-207ENST00000450066 PRRC1Q96M27 445 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 C14orf105Q9NVL8 296 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 TMCC3Q9ULS5 477 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 GPR55Q9Y2T6 319 aaPredicted RBP13.22□□□□□ -0.29
USP39-207ENST00000450066 CACNA1HO95180 2353 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 CENPVL1A0A0U1RR11 272 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 POLR1CO15160 346 aaPredicted RBP13.22□□□□□ -0.29
USP39-207ENST00000450066 DDAH2O95865 285 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 NID1P14543 1247 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 SF3A2Q15428 464 aaKnown RBP13.22□□□□□ -0.29
USP39-207ENST00000450066 ZNF836Q6ZNA1 936 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 OVCH1Q7RTY7 1134 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 OR4N2Q8NGD1 307 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 SLC2A12Q8TD20 617 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 SLC46A1Q96NT5 459 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 G6PC3Q9BUM1 346 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 FNDC11Q9BVV2 318 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 ITPAQ9BY32 194 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 GRIP2Q9C0E4 1043 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 RLIMQ9NVW2 624 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 KCNE5Q9UJ90 142 aa13.22□□□□□ -0.29
USP39-207ENST00000450066 CFL2Q9Y281 166 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms