RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 LSM1O15116 133 aaKnown RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 ZWINTO95229 277 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 KCNH1O95259 989 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 PRPS2P11908 318 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 CPN1P15169 458 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 DPP4P27487 766 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 MAPK1P28482 360 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 GABRA3P34903 492 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 SERPINB5P36952 375 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 PEX19P40855 299 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 ASMTP46597 345 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 ASCL1P50553 236 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 MANFP55145 182 aaKnown RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 ARSKQ6UWY0 536 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 ZCCHC23Q6ZST2 131 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 SZRD1Q7Z422 152 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 R3HCC1LQ7Z5L2 792 aaKnown RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 TMEM200AQ86VY9 491 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 RELL2Q8NC24 303 aaPredicted RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 CEP70Q8NHQ1 597 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 CLHC1Q8NHS4 586 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 MBD3L2Q8NHZ7 208 aaPredicted RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 CAVIN3Q969G5 261 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 CIDECQ96AQ7 238 aaPredicted RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 ZBED6CLQ96FA7 236 aaPredicted RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 ZNF764Q96H86 408 aaPredicted RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 FCRL1Q96LA6 429 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 PPP3R2Q96LZ3 170 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 LMF2Q9BU23 707 aaKnown RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 EQTNQ9NQ60 294 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 BAIAP2L1Q9UHR4 511 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 ABCG2Q9UNQ0 655 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 RPH3AQ9Y2J0 694 aaPredicted RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 MRPS18CQ9Y3D5 142 aaKnown RBP13.88□□□□□ -0.19
CHD3-205ENST00000449744 L3MBTL1Q9Y468 752 aa13.88□□□□□ -0.19
CHD3-205ENST00000449744 SYT5O00445 386 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 TBX19O60806 448 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 PSMG1O95456 288 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 IL33O95760 270 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 TCEA1P23193 301 aaKnown RBP13.87□□□□□ -0.19
CHD3-205ENST00000449744 CTSSP25774 331 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 OPRM1P35372 400 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 STARP49675 285 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 ZNF136P52737 540 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 DGKQP52824 942 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 PRKAG1P54619 331 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 GAS1P54826 345 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 GFRA1P56159 465 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 DLX5P56178 289 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 DSCR4P56555 118 aaPredicted RBP13.87□□□□□ -0.19
CHD3-205ENST00000449744 STX5Q13190 355 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 VPS26BQ4G0F5 336 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 ZNF385BQ569K4 471 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 CDH24Q86UP0 819 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 PPP1R14CQ8TAE6 165 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 GPR151Q8TDV0 419 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 RNF138Q8WVD3 245 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 RNASE6Q93091 150 aaKnown RBP13.87□□□□□ -0.19
CHD3-205ENST00000449744 MTERF3Q96E29 417 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 TUBA1CQ9BQE3 449 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 DSN1Q9H410 356 aa13.87□□□□□ -0.19
CHD3-205ENST00000449744 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHD3-205ENST00000449744 FOXD3Q9UJU5 478 aaPredicted RBP13.87□□□□□ -0.19
CHD3-205ENST00000449744 V9GYY5 206 aaPredicted RBP13.87□□□□□ -0.19
CHD3-205ENST00000449744 APCP25054 2843 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 TMIGD3P0DMS9 266 aaPredicted RBP13.86□□□□□ -0.19
CHD3-205ENST00000449744 POU3F2P20265 443 aaPredicted RBP13.86□□□□□ -0.19
CHD3-205ENST00000449744 CHMP24386 653 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 HPCAL1P37235 193 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 RPL3P39023 403 aaKnown RBP13.86□□□□□ -0.19
CHD3-205ENST00000449744 KIR2DL3P43628 341 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 SNTB1Q13884 538 aaKnown RBP13.86□□□□□ -0.19
CHD3-205ENST00000449744 PDE7AQ13946 482 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 UGT3A2Q3SY77 523 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 KRT71Q3SY84 523 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 LRIG3Q6UXM1 1119 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 CHMP1BQ7LBR1 199 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 CDRT4Q8N9R6 151 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 NUP43Q8NFH3 380 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 TM9SF2Q99805 663 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 TBL1XR1Q9BZK7 514 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 PTGES2Q9H7Z7 377 aa13.86□□□□□ -0.19
CHD3-205ENST00000449744 ACSS1Q9NUB1 689 aaPredicted RBP13.86□□□□□ -0.19
CHD3-205ENST00000449744 FAM120CQ9NX05 1096 aaKnown RBP13.86□□□□□ -0.19
CHD3-205ENST00000449744 CLCA1A8K7I4 914 aa13.85□□□□□ -0.19
CHD3-205ENST00000449744 EEF1E1-BLOC1S5C9J1V9 151 aa13.85□□□□□ -0.19
CHD3-205ENST00000449744 CTIFO43310 598 aaKnown RBP13.85□□□□□ -0.19
CHD3-205ENST00000449744 EEF1E1O43324 174 aaKnown RBP13.85□□□□□ -0.19
CHD3-205ENST00000449744 FADS1O60427 444 aa13.85□□□□□ -0.19
CHD3-205ENST00000449744 PEX11AO75192 247 aa13.85□□□□□ -0.19
CHD3-205ENST00000449744 BPGMP07738 259 aa13.85□□□□□ -0.19
CHD3-205ENST00000449744 BCKDHAP12694 445 aa13.85□□□□□ -0.19
CHD3-205ENST00000449744 CREB1P16220 341 aa13.85□□□□□ -0.19
CHD3-205ENST00000449744 HK1P19367 917 aa13.85□□□□□ -0.19
CHD3-205ENST00000449744 LHX2P50458 406 aa13.85□□□□□ -0.19
CHD3-205ENST00000449744 AGFG1P52594 562 aaKnown RBP13.85□□□□□ -0.19
CHD3-205ENST00000449744 ATP6AP1LQ52LC2 224 aa13.85□□□□□ -0.19
CHD3-205ENST00000449744 RAET1LQ5VY80 246 aa13.85□□□□□ -0.19
CHD3-205ENST00000449744 MARCH3Q86UD3 253 aa13.85□□□□□ -0.19
CHD3-205ENST00000449744 NUDCD3Q8IVD9 361 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms