RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 KHKP50053 298 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 LIM2P55344 173 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 BTN3A2P78410 334 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 PITPNAQ00169 270 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 PRKCZQ05513 592 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 EXOSC2Q13868 293 aaKnown RBP11.69□□□□□ -0.54
UBE3B-204ENST00000449510 ACSM3Q53FZ2 586 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 LY6G5CQ5SRR4 150 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 RAB12Q6IQ22 244 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 ZER1Q7Z7L7 766 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 FBXO15Q8NCQ5 510 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-204ENST00000449510 BBS1Q8NFJ9 593 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 OR13C5Q8NGS8 318 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 RGMAQ96B86 450 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 CCDC3Q9BQI4 270 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 RC3H2Q9HBD1 1191 aaKnown RBP11.69□□□□□ -0.54
UBE3B-204ENST00000449510 OR2S2Q9NQN1 319 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 TMEM45AQ9NWC5 275 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 FKBP14Q9NWM8 211 aa11.69□□□□□ -0.54
UBE3B-204ENST00000449510 IGLV3-10A0A075B6K4 115 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 A0A1W2PRQ8 180 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 DISC1C4P0D8 188 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 BLOC1S5-TXNDC5H3BN57 136 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 SLC19A2O60779 497 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 FZD7O75084 574 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 MAS1P04201 325 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 ACVR2AP27037 513 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 IMPA1P29218 277 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 CD79BP40259 229 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 HCCSP53701 268 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 BIKQ13323 160 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 HSD17B12Q53GQ0 312 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 GRHL2Q6ISB3 625 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 USP50Q70EL3 339 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-204ENST00000449510 KCTD9Q7L273 389 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 FAM220AQ7Z4H9 259 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 ZNF461Q8TAF7 563 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 TSNAXQ99598 290 aaKnown RBP11.68□□□□□ -0.54
UBE3B-204ENST00000449510 NRTNQ99748 197 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 CDCA4Q9BXL8 241 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 NEUROD4Q9HD90 331 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 FBXL2Q9UKC9 423 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 PLCL2Q9UPR0 1127 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 SLC9B1P1A6NJY1 282 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 TOR1AO14656 332 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 PPM1DO15297 605 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 PLA2G10O15496 165 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 SCO2O43819 266 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 MAPK9P45984 424 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 GBX2P52951 348 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-204ENST00000449510 SKP1P63208 163 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 YIF1BQ5BJH7 314 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 TMEM69Q5SWH9 247 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 GPR155Q7Z3F1 870 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 ZNF676Q8N7Q3 588 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 OR5P2Q8WZ92 322 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 OSTF1Q92882 214 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 PITX2Q99697 317 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 GABARAPL3Q9BY60 117 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 MCCC2Q9HCC0 563 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 PLCXD1Q9NUJ7 323 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 TDP1Q9NUW8 608 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 ZNF705EA8MWA4 302 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-204ENST00000449510 IFNGP01579 166 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 ARAFP10398 606 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 M6PRP20645 277 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 PKLRP30613 574 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 MPIP34949 423 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 CRYBB2P43320 205 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 NXPE4Q6UWF7 544 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 COX18Q8N8Q8 333 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 OR5W2Q8NH69 310 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 SUSD6Q92537 303 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 CREB3L1Q96BA8 519 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 C4orf36Q96KX1 117 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 SAMD11Q96NU1 681 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 B3GNT4Q9C0J1 378 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 NIPAL2Q9H841 368 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 TMEM27Q9HBJ8 222 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 CUEDC1Q9NWM3 386 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-204ENST00000449510 NEU3Q9UQ49 428 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 NAALAD2Q9Y3Q0 740 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 CHST2Q9Y4C5 530 aa11.68□□□□□ -0.54
UBE3B-204ENST00000449510 LTBP3Q9NS15 1303 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 NRAPQ86VF7 1730 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 C5orf51A6NDU8 294 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 OR2AT4A6NND4 320 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 ZAR1LA6NP61 321 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 GRXCR1A8MXD5 290 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 CACNB4O00305 520 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-204ENST00000449510 PDCD5O14737 125 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 RGS13O14921 159 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 SIGLEC5O15389 551 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 SLC31A1O15431 190 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 HOXA2O43364 376 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 TRIM3O75382 744 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-204ENST00000449510 RGS9O75916 674 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-204ENST00000449510 ACADMP11310 421 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 FUT1P19526 365 aa11.67□□□□□ -0.54
UBE3B-204ENST00000449510 CD22P20273 847 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms