RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 MBD3L5A6NJ08 208 aaPredicted RBP17.89■□□□□ 0.45
VCP-203ENST00000448530 SPAG7O75391 227 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 IFI6P09912 130 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 DDX5P17844 614 aaKnown RBP17.89■□□□□ 0.45
VCP-203ENST00000448530 SDC1P18827 310 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 TCEA1P23193 301 aaKnown RBP17.89■□□□□ 0.45
VCP-203ENST00000448530 OPRM1P35372 400 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 ASMTP46597 345 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 RFX3P48380 749 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 ZNF136P52737 540 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 GAB1Q13480 694 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 ARL13AQ5H913 290 aaPredicted RBP17.89■□□□□ 0.45
VCP-203ENST00000448530 ANKRD26P1Q6NSI1 321 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 EMBQ6PCB8 327 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 Q6ZSR9 355 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 ZNF551Q7Z340 670 aaPredicted RBP17.89■□□□□ 0.45
VCP-203ENST00000448530 OR2T11Q8NH01 316 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 MBD3L2Q8NHZ7 208 aaPredicted RBP17.89■□□□□ 0.45
VCP-203ENST00000448530 RNASE6Q93091 150 aaKnown RBP17.89■□□□□ 0.45
VCP-203ENST00000448530 ZBED6CLQ96FA7 236 aaPredicted RBP17.89■□□□□ 0.45
VCP-203ENST00000448530 ZNF764Q96H86 408 aaPredicted RBP17.89■□□□□ 0.45
VCP-203ENST00000448530 TM9SF2Q99805 663 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 TUBA1CQ9BQE3 449 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 TUBB1Q9H4B7 451 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 EQTNQ9NQ60 294 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 SLC17A7Q9P2U7 560 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 ABCG2Q9UNQ0 655 aa17.89■□□□□ 0.45
VCP-203ENST00000448530 KCNH1O95259 989 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 PSMG1O95456 288 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 CHRNGP07510 517 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 FGF4P08620 206 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 TMIGD3P0DMS9 266 aaPredicted RBP17.88■□□□□ 0.45
VCP-203ENST00000448530 PRPS2P11908 318 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 GABRA3P34903 492 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 MANFP55145 182 aaKnown RBP17.88■□□□□ 0.45
VCP-203ENST00000448530 GFRA1P56159 465 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 DSCR4P56555 118 aaPredicted RBP17.88■□□□□ 0.45
VCP-203ENST00000448530 VPS26BQ4G0F5 336 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 RFTN2Q52LD8 501 aaPredicted RBP17.88■□□□□ 0.45
VCP-203ENST00000448530 CHMP1BQ7LBR1 199 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 SZRD1Q7Z422 152 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 ZZZ3Q8IYH5 903 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 CEP70Q8NHQ1 597 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 TCP10LQ8TDR4 215 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 RNF138Q8WVD3 245 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 TWIST2Q8WVJ9 160 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 FCRL1Q96LA6 429 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 LMF2Q9BU23 707 aaKnown RBP17.88■□□□□ 0.45
VCP-203ENST00000448530 MECRQ9BV79 373 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 PTGES2Q9H7Z7 377 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 FAM120CQ9NX05 1096 aaKnown RBP17.88■□□□□ 0.45
VCP-203ENST00000448530 RPH3AQ9Y2J0 694 aaPredicted RBP17.88■□□□□ 0.45
VCP-203ENST00000448530 KIAA1549Q9HCM3 1950 aa17.88■□□□□ 0.45
VCP-203ENST00000448530 ANKHD1Q8IWZ3 2542 aaKnown RBP17.88■□□□□ 0.45
VCP-203ENST00000448530 CSMD2Q7Z408 3487 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 TMEM114B3SHH9 223 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 EEF1E1-BLOC1S5C9J1V9 151 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 LSM1O15116 133 aaKnown RBP17.87■□□□□ 0.45
VCP-203ENST00000448530 EEF1E1O43324 174 aaKnown RBP17.87■□□□□ 0.45
VCP-203ENST00000448530 TBX19O60806 448 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 IL33O95760 270 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 CHMP24386 653 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 MAPK1P28482 360 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 STARP49675 285 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 PRKAG1P54619 331 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 GAS1P54826 345 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 STX5Q13190 355 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 SNTB1Q13884 538 aaKnown RBP17.87■□□□□ 0.45
VCP-203ENST00000448530 FBXL19-AS1Q494R0 122 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 R3HCC1LQ7Z5L2 792 aaKnown RBP17.87■□□□□ 0.45
VCP-203ENST00000448530 KIF18BQ86Y91 864 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 C9orf106Q8NAJ2 232 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 CLHC1Q8NHS4 586 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 AGR3Q8TD06 166 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 GPR151Q8TDV0 419 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 AENQ8WTP8 325 aaKnown RBP17.87■□□□□ 0.45
VCP-203ENST00000448530 CIDECQ96AQ7 238 aaPredicted RBP17.87■□□□□ 0.45
VCP-203ENST00000448530 PPP3R2Q96LZ3 170 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 ZFP3Q96NJ6 502 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 SH3GL2Q99962 352 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 DSN1Q9H410 356 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 BAIAP2L1Q9UHR4 511 aa17.87■□□□□ 0.45
VCP-203ENST00000448530 CLCA1A8K7I4 914 aa17.86■□□□□ 0.45
VCP-203ENST00000448530 TMEM233B4DJY2 109 aa17.86■□□□□ 0.45
VCP-203ENST00000448530 PIP5K1BO14986 540 aa17.86■□□□□ 0.45
VCP-203ENST00000448530 FADS1O60427 444 aa17.86■□□□□ 0.45
VCP-203ENST00000448530 IL18BPO95998 194 aa17.86■□□□□ 0.45
VCP-203ENST00000448530 SERPINB5P36952 375 aa17.86■□□□□ 0.45
VCP-203ENST00000448530 HPCAL1P37235 193 aa17.86■□□□□ 0.45
VCP-203ENST00000448530 LHX2P50458 406 aa17.86■□□□□ 0.45
VCP-203ENST00000448530 AGFG1P52594 562 aaKnown RBP17.86■□□□□ 0.45
VCP-203ENST00000448530 ZCCHC23Q6ZST2 131 aa17.86■□□□□ 0.45
VCP-203ENST00000448530 WNT2BQ93097 391 aa17.86■□□□□ 0.45
VCP-203ENST00000448530 MTERF3Q96E29 417 aa17.86■□□□□ 0.45
VCP-203ENST00000448530 TBL1XR1Q9BZK7 514 aa17.86■□□□□ 0.45
VCP-203ENST00000448530 ACBD3Q9H3P7 528 aa17.86■□□□□ 0.45
VCP-203ENST00000448530 ACSS1Q9NUB1 689 aaPredicted RBP17.86■□□□□ 0.45
VCP-203ENST00000448530 DNAJB12Q9NXW2 375 aaKnown RBP17.86■□□□□ 0.45
VCP-203ENST00000448530 ZIC3O60481 467 aa17.85■□□□□ 0.45
VCP-203ENST00000448530 SLU7O95391 586 aaKnown RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms