RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SIM1P81133 766 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 GALK2Q01415 458 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 RAB40BQ12829 278 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 AAK1Q2M2I8 961 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 NDUFAF5Q5TEU4 345 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 KIAA1211LQ6NV74 962 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 TTLL10Q6ZVT0 673 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 IFNL1Q8IU54 200 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 ARHGAP12Q8IWW6 846 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 RHOXF1Q8NHV9 184 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 SLC7A13Q8TCU3 470 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 STRA6Q9BX79 667 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 ARHGAP39Q9C0H5 1083 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 HHATLQ9HCP6 504 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 MAN2C1Q9NTJ4 1040 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 NRXN3Q9Y4C0 1643 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 PEAK1Q9H792 1746 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 A0A1W2PQ09 198 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 FAM221BA6H8Z2 402 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 H3BUI4 141 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 K7ERQ8 282 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 ALDOBP05062 364 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 TFAP2AP05549 437 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 MSL3P1P0C860 447 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 UGT2B7P16662 529 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 PRKACAP17612 351 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 GM2AP17900 193 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 SDC1P18827 310 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 SLC5A2P31639 672 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 SUOXP51687 545 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 TAP2Q03519 686 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 FPGSQ05932 587 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 MGAT3Q09327 533 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 DPY19L2P1Q6NXN4 242 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 TMEM150AQ86TG1 271 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 OR4N5Q8IXE1 308 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 TOR1AIP2Q8NFQ8 470 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 ZDHHC12Q96GR4 267 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 PITX2Q99697 317 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 SULT4A1Q9BR01 284 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 GPR62Q9BZJ7 368 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 MKRN2Q9H000 416 aaKnown RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 PPP4R1LQ9P1A2 415 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 CD300AQ9UGN4 299 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 GPR45Q9Y5Y3 372 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 COL1A1P02452 1464 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 IGKV6-21A0A0C4DH24 114 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 RNASET2O00584 256 aaKnown RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 ARPC1BO15143 372 aaKnown RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 CSF1P09603 554 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 HOXB9P17482 250 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 SSTR4P31391 388 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 THBS2P35442 1172 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 DHPSP49366 369 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 MRPL49Q13405 166 aaKnown RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 AKR1C8PQ5T2L2 129 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 PPP2R2DQ66LE6 453 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 OR5W2Q8NH69 310 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 ZNF417Q8TAU3 575 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 DNAJA3Q96EY1 480 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 RRNAD1Q96FB5 475 aaKnown RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 TEPSINQ96N21 525 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 VRK1Q99986 396 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 DEFB126Q9BYW3 111 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 IL21RQ9HBE5 538 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 CNIH4Q9P003 139 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 IL17CQ9P0M4 197 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 KLF15Q9UIH9 416 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 AK6Q9Y3D8 172 aaKnown RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 AHDC1Q5TGY3 1603 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 TOPAZ1Q8N9V7 1692 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 A0A1B0GV50 99 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 UNCXA6NJT0 531 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 PPP1R3DO95685 299 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 APBB3O95704 486 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 IFNA17P01571 189 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 AKR1C2P52895 323 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 SELENOVP59797 346 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 CCINQ13939 588 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 GPR19Q15760 415 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 C3P1Q6ZMU1 363 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 CYB561A3Q8NBI2 242 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 BEST4Q8NFU0 473 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 OR51L1Q8NGJ5 315 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 GPR148Q8TDV2 347 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 ZNF436Q9C0F3 470 aaPredicted RBP7.37□□□□□ -1.23
NEDD9-204ENST00000448183 FN3KQ9H479 309 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 PDE7BQ9NP56 450 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 C2orf42Q9NWW7 574 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 EMCNQ9ULC0 261 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 SPO11Q9Y5K1 396 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 CSNK1G3Q9Y6M4 447 aa7.37□□□□□ -1.23
NEDD9-204ENST00000448183 SULT1C2O00338 296 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 CASC3O15234 703 aaKnown RBP7.36□□□□□ -1.23
NEDD9-204ENST00000448183 SSX4O60224 188 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 DCNP07585 359 aaKnown RBP7.36□□□□□ -1.23
NEDD9-204ENST00000448183 MAOAP21397 527 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 TNFSF8P32971 234 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 DLSTP36957 453 aa7.36□□□□□ -1.23
NEDD9-204ENST00000448183 ALDH3B1P43353 468 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms