RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 PCDHGB3Q9Y5G1 929 aa15□□□□□ -0.01
SF3A1-204ENST00000447376 RELNP78509 3460 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 PRSS51A0A1B0GVH4 220 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 RNASET2O00584 256 aaKnown RBP14.99□□□□□ -0.01
SF3A1-204ENST00000447376 GNB5O14775 395 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 ICOSLGO75144 302 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 IGHG3P01860 377 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 IL6P05231 212 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 EFNA1P20827 205 aaPredicted RBP14.99□□□□□ -0.01
SF3A1-204ENST00000447376 GABRA3P34903 492 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 CCT3P49368 545 aaKnown RBP14.99□□□□□ -0.01
SF3A1-204ENST00000447376 TP53BP2Q13625 1128 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 FAM174BQ3ZCQ3 159 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 WLSQ5T9L3 541 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 BICRALQ6AI39 1079 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 OR4F3Q6IEY1 312 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 ANGPTL8Q6UXH0 198 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 RPTNQ6XPR3 784 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 CD163Q86VB7 1156 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 RFWD2Q8NHY2 731 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 MARK4Q96L34 752 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 NODALQ96S42 347 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 TP63Q9H3D4 680 aaPredicted RBP14.99□□□□□ -0.01
SF3A1-204ENST00000447376 RABEP2Q9H5N1 569 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 MRGBPQ9NV56 204 aa14.99□□□□□ -0.01
SF3A1-204ENST00000447376 LRRC3CA6NJW4 275 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 FIGNL2A6NMB9 653 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 NPIPA2E9PIF3 369 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 NPIPA3F8WFD2 350 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 AQP7O14520 342 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 TSPAN2O60636 221 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 NME6O75414 186 aaPredicted RBP14.98□□□□□ -0.01
SF3A1-204ENST00000447376 CBR3O75828 277 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 WISP2O76076 250 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 C6orf47O95873 294 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 GAB1Q13480 694 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 SPANXN4Q5MJ08 99 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 METTL21CQ5VZV1 264 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 TIGD3Q6B0B8 471 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 TMEM211Q6ICI0 200 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 MFSD12Q6NUT3 480 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 TRILQ7L0X0 811 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 COX18Q8N8Q8 333 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 OR4N2Q8NGD1 307 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 PSMA8Q8TAA3 256 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 SFXN5Q8TD22 340 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 FAM120BQ96EK7 910 aaKnown RBP14.98□□□□□ -0.01
SF3A1-204ENST00000447376 RMND5BQ96G75 393 aaPredicted RBP14.98□□□□□ -0.01
SF3A1-204ENST00000447376 OR52E6Q96RD3 313 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 G6PC3Q9BUM1 346 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 PROK2Q9HC23 129 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 ACKR4Q9NPB9 350 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 TMEM45AQ9NWC5 275 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 NTMQ9P121 344 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 ABCG2Q9UNQ0 655 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 C15orf41Q9Y2V0 281 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 WIF1Q9Y5W5 379 aa14.98□□□□□ -0.01
SF3A1-204ENST00000447376 C15orf38-AP3S2A0A0A6YYH1 394 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 A0A1B0GVC2 190 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 E9PLN8 166 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 SNPHO15079 494 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 ZG16O60844 167 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 IL33O95760 270 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 PGRP06401 933 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 RFPL3SP0C7P2 107 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 CYP4B1P13584 511 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 HPGDP15428 266 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 NCF2P19878 526 aaPredicted RBP14.97□□□□□ -0.01
SF3A1-204ENST00000447376 MRPL19P49406 292 aaKnown RBP14.97□□□□□ -0.01
SF3A1-204ENST00000447376 ATP4BP51164 291 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 ARFIP2P53365 341 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 SQLEQ14534 574 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 WDR53Q7Z5U6 358 aaPredicted RBP14.97□□□□□ -0.01
SF3A1-204ENST00000447376 DOLPP1Q86YN1 238 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 OR4A15Q8NGL6 344 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 ADAMTS15Q8TE58 950 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 NUDT8Q8WV74 236 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 CCDC120Q96HB5 630 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 TEX37Q96LM6 180 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 GNRHR2Q96P88 292 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 VKORC1Q9BQB6 163 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 TMEM120AQ9BXJ8 343 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 TBL1XR1Q9BZK7 514 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 RMND5AQ9H871 391 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 GALNT9Q9HCQ5 603 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 PPP4R1LQ9P1A2 415 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 BTNL2Q9UIR0 455 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 MEMO1Q9Y316 297 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 POLEQ07864 2286 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 LRRK2Q5S007 2527 aa14.97□□□□□ -0.01
SF3A1-204ENST00000447376 EXPH5Q8NEV8 1989 aa14.96□□□□□ -0.01
SF3A1-204ENST00000447376 FAM234BA2RU67 622 aa14.96□□□□□ -0.01
SF3A1-204ENST00000447376 WIPF3A6NGB9 483 aa14.96□□□□□ -0.01
SF3A1-204ENST00000447376 NKX2-2O95096 273 aa14.96□□□□□ -0.01
SF3A1-204ENST00000447376 HMGN2P05204 90 aaKnown RBP14.96□□□□□ -0.01
SF3A1-204ENST00000447376 CELA3AP09093 270 aa14.96□□□□□ -0.01
SF3A1-204ENST00000447376 ATP6V1C1P21283 382 aa14.96□□□□□ -0.01
SF3A1-204ENST00000447376 LCN1P31025 176 aa14.96□□□□□ -0.01
SF3A1-204ENST00000447376 EVI2BP34910 448 aa14.96□□□□□ -0.01
SF3A1-204ENST00000447376 TRPC1P48995 793 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms