RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ZNF48Q96MX3 618 aaPredicted RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 SFXN2Q96NB2 322 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 VAT1Q99536 393 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 INPP5KQ9BT40 448 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 ALOXE3Q9BYJ1 711 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 WWTR1Q9GZV5 400 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 MRPL47Q9HD33 250 aaKnown RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 FBXO34Q9NWN3 711 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 KLHL8Q9P2G9 620 aaPredicted RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 XPR1Q9UBH6 696 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 STARD9Q9P2P6 4700 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 CLPSL1A2RUU4 121 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 CCDC162PA2VCL2 907 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 C3orf70A6NLC5 250 aaPredicted RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 CLPXO76031 633 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 FTLP02792 175 aaPredicted RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 DHRS4L1P0CG22 281 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 GZMAP12544 262 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 KDELR1P24390 212 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 MGAT1P26572 445 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 IMPA1P29218 277 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 APOBEC3AP31941 199 aaPredicted RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 SKIV2L2P42285 1042 aaKnown RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 SLC6A8P48029 635 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 GEMP55040 296 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 EEFSECP57772 596 aaKnown RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 RGS1Q08116 209 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 ZP4Q12836 540 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 BAMBIQ13145 260 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 SEMA3AQ14563 771 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 PPA1Q15181 289 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 KLHL22Q53GT1 634 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 THEMIS2Q5TEJ8 643 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 ADNP2Q6IQ32 1131 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 SLC22A25Q6T423 547 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 TFAP2EQ6VUC0 442 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 SSX8Q7RTT4 187 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 PID1Q7Z2X4 250 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 VSIG1Q86XK7 387 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 UBQLNLQ8IYU4 475 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 ZNF786Q8N393 782 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 METTL25Q8N6Q8 603 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 ABHD11Q8NFV4 315 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 OR4F5Q8NH21 305 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 CLDND2Q8NHS1 167 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.83□□□□□ -1.96
PMS1-215ENST00000447232 RDH11Q8TC12 318 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 RAPGEF5Q92565 580 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 DTNBP1Q96EV8 351 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 TBX15Q96SF7 602 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 CSF3RQ99062 836 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 B9D2Q9BPU9 175 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 NPLQ9BXD5 320 aaPredicted RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 P2RY12Q9H244 342 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 KLHL31Q9H511 634 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 IPPKQ9H8X2 491 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 LPAR2Q9HBW0 351 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 SLC52A3Q9NQ40 469 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 FAM114A2Q9NRY5 505 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 ABCF3Q9NUQ8 709 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 OPN4Q9UHM6 478 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 FEZ2Q9UHY8 353 aaPredicted RBP2.83□□□□□ -1.96
PMS1-215ENST00000447232 POU2F3Q9UKI9 436 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 CLEC4AQ9UMR7 237 aa2.83□□□□□ -1.96
PMS1-215ENST00000447232 CAPN14A8MX76 684 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 B4DXG7 233 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 J3QLI3 93 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 APOL1O14791 398 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 DHHO43323 396 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 ICOSLGO75144 302 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 ANXA9O76027 345 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 NDUFA7O95182 113 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 SLU7O95391 586 aaKnown RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 MPIG6BO95866 241 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 TFP02787 698 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 CATP04040 527 aaKnown RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 CLPSP04118 112 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 MYBL1P10243 752 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 GAAP10253 952 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 TNNI3P19429 210 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 PTAFRP25105 342 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 CD40P25942 277 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 RAG2P55895 527 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 CTBP2P56545 445 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 TAS2R40P59535 323 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 TBPL1P62380 186 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 DBPQ10586 325 aaPredicted RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 GPS1Q13098 491 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 SNTA1Q13424 505 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 SERTAD2Q14140 314 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 HADHQ16836 314 aaKnown RBP2.82□□□□□ -1.96
PMS1-215ENST00000447232 ZNF628Q5EBL2 1059 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 SLC30A6Q6NXT4 461 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 ZNF549Q6P9A3 640 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 C16orf87Q6PH81 154 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 TMEM108Q6UXF1 575 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 SYT10Q6XYQ8 523 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 SPATC1Q76KD6 591 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 ZNF534Q76KX8 674 aa2.82□□□□□ -1.96
PMS1-215ENST00000447232 R3HCC1LQ7Z5L2 792 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms