RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 CEP70Q8NHQ1 597 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 PIWIL2Q8TC59 973 aaKnown RBP13.55□□□□□ -0.24
HDAC4-204ENST00000446876 LRRC8CQ8TDW0 803 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 DYDC1Q8WWB3 177 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 JADE3Q92613 823 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 HOXB13Q92826 284 aaPredicted RBP13.55□□□□□ -0.24
HDAC4-204ENST00000446876 TEX37Q96LM6 180 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 OR52B2Q96RD2 323 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 UBQLN3Q9H347 655 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 SERHLQ9NQF3 203 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 PNPLA3Q9NST1 481 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 AIG1Q9NVV5 245 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 SUCOQ9UBS9 1254 aaKnown RBP13.55□□□□□ -0.24
HDAC4-204ENST00000446876 MEMO1Q9Y316 297 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 SPTBN1Q01082 2364 aaKnown RBP13.55□□□□□ -0.24
HDAC4-204ENST00000446876 DOPEY1Q5JWR5 2465 aa13.55□□□□□ -0.24
HDAC4-204ENST00000446876 PCNX3Q9H6A9 2034 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 MED12Q93074 2177 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 UTP20O75691 2785 aaKnown RBP13.54□□□□□ -0.24
HDAC4-204ENST00000446876 TRGV5A0A0B4J1U4 118 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 A0A1B0GVC2 190 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 B4DXG7 233 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 AQP7O14520 342 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 ADAM10O14672 748 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 NKX2-2O95096 273 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 IL33O95760 270 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 HMGN2P05204 90 aaKnown RBP13.54□□□□□ -0.24
HDAC4-204ENST00000446876 ESRRAP11474 423 aaPredicted RBP13.54□□□□□ -0.24
HDAC4-204ENST00000446876 EVI2BP34910 448 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 CCT3P49368 545 aaKnown RBP13.54□□□□□ -0.24
HDAC4-204ENST00000446876 UFM1P61960 85 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 PHC1P78364 1004 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 MRPS22P82650 360 aaKnown RBP13.54□□□□□ -0.24
HDAC4-204ENST00000446876 PRR5P85299 388 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 TP53BP2Q13625 1128 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 LASP1Q14847 261 aaKnown RBP13.54□□□□□ -0.24
HDAC4-204ENST00000446876 TOMM20Q15388 145 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 LSM12Q3MHD2 195 aaKnown RBP13.54□□□□□ -0.24
HDAC4-204ENST00000446876 SPDYE7PQ495Y7 208 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 EIPR1Q53HC9 387 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 SPANXN4Q5MJ08 99 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 OR5M10Q6IEU7 315 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 ZAR1Q86SH2 424 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 LRRC34Q8IZ02 419 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 RPRMLQ8N4K4 120 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 CDRT4Q8N9R6 151 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 WDSUB1Q8N9V3 476 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 OR1J4Q8NGS1 313 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 PSMA8Q8TAA3 256 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 RNF138Q8WVD3 245 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 CHMP6Q96FZ7 201 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 MAELQ96JY0 434 aaKnown RBP13.54□□□□□ -0.24
HDAC4-204ENST00000446876 INTS9Q9NV88 658 aaKnown RBP13.54□□□□□ -0.24
HDAC4-204ENST00000446876 WIF1Q9Y5W5 379 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 USH1CQ9Y6N9 552 aa13.54□□□□□ -0.24
HDAC4-204ENST00000446876 FLNBO75369 2602 aaKnown RBP13.53□□□□□ -0.24
HDAC4-204ENST00000446876 PHF3Q92576 2039 aaKnown RBP13.53□□□□□ -0.24
HDAC4-204ENST00000446876 SLCO1B7G3V0H7 640 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 DIAPH2O60879 1101 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 ALOX5P09917 674 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 IL12AP29459 219 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 KIR3DL1P43629 444 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 GAS1P54826 345 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 PSPHP78330 225 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 STX5Q13190 355 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 SNTA1Q13424 505 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 FAM174BQ3ZCQ3 159 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 WIPI1Q5MNZ9 446 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-204ENST00000446876 EXOSC6Q5RKV6 272 aaKnown RBP13.53□□□□□ -0.24
HDAC4-204ENST00000446876 CCNJQ5T5M9 372 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 FIGNL1Q6PIW4 674 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 SPATA19Q7Z5L4 167 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 YRDCQ86U90 279 aaKnown RBP13.53□□□□□ -0.24
HDAC4-204ENST00000446876 MARVELD2Q8N4S9 558 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 NATD1Q8N6N6 113 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 OR4A15Q8NGL6 344 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 ITLN2Q8WWU7 325 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-204ENST00000446876 CDS1Q92903 461 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 C7orf26Q96N11 449 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 RTN4RQ9BZR6 473 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 NEUROD4Q9HD90 331 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 ACKR4Q9NPB9 350 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 FBXO34Q9NWN3 711 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 QPCTLQ9NXS2 382 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 PLEKHB1Q9UF11 243 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-204ENST00000446876 FBXL2Q9UKC9 423 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 SLC6A5Q9Y345 797 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 GPR45Q9Y5Y3 372 aa13.53□□□□□ -0.24
HDAC4-204ENST00000446876 C15orf38-AP3S2A0A0A6YYH1 394 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 TTC36A6NLP5 189 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 E9PBE3 544 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 RNASET2O00584 256 aaKnown RBP13.52□□□□□ -0.25
HDAC4-204ENST00000446876 SUSD5O60279 629 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 FADS1O60427 444 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 HCN1O60741 890 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 SCN2BO60939 215 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 KCNH1O95259 989 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 UTS2O95399 124 aa13.52□□□□□ -0.25
HDAC4-204ENST00000446876 CPSF4O95639 269 aaKnown RBP13.52□□□□□ -0.25
HDAC4-204ENST00000446876 HPNP05981 417 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms