RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 KRT20P35900 424 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 PIGAP37287 484 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 PPICP45877 212 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 SSR4P51571 173 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 TMPRSS3P57727 454 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 MLF1P58340 268 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 HOXC5Q00444 222 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 CDK6Q00534 326 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 MS4A2Q01362 244 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 PMP22Q01453 160 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 VAC14Q08AM6 782 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 MAPK14Q16539 360 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 FLYWCH1Q4VC44 716 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 COQ5Q5HYK3 327 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 ACER2Q5QJU3 275 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 ATAD3BQ5T9A4 648 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 IRAK1BP1Q5VVH5 260 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 ERMP1Q7Z2K6 904 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 GPR155Q7Z3F1 870 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 MARCH3Q86UD3 253 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 COMTD1Q86VU5 262 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 CALHM3Q86XJ0 350 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 SPPL2CQ8IUH8 684 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 ULK2Q8IYT8 1036 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 MICU2Q8IYU8 434 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 LGI4Q8N135 537 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 SLC5A8Q8N695 610 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 FAM86B1Q8N7N1 296 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF441Q8N8Z8 693 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 OR8J3Q8NGG0 315 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 VANGL1Q8TAA9 524 aaPredicted RBP6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 ASB15Q8WXK1 588 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 THAP4Q8WY91 577 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 UTP4Q969X6 686 aaKnown RBP6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 FAM162AQ96A26 154 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 MOAP1Q96BY2 351 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 DNAJA3Q96EY1 480 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 TPD52L3Q96J77 140 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 COL21A1Q96P44 957 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 HOPXQ9BPY8 73 aaPredicted RBP6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 LMF2Q9BU23 707 aaKnown RBP6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 BTBD2Q9BX70 525 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 RSPO3Q9BXY4 272 aaPredicted RBP6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 LHPPQ9H008 270 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 PIGUQ9H490 435 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 CTPS2Q9NRF8 586 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 TMEM45AQ9NWC5 275 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 MYOTQ9UBF9 498 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 P2RX2Q9UBL9 471 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 KCNE5Q9UJ90 142 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 NTNG1Q9Y2I2 539 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 NPFFR2Q9Y5X5 522 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 NCOR2Q9Y618 2525 aa6.96□□□□□ -1.3
SF3A3P1-201ENST00000446317 LOC400499M0QZD8 3231 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 ELOVL7A1L3X0 281 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 FRG2CA6NGY1 282 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 OR6C76A6NM76 312 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 FAM220BPB1ANY3 271 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 K7ENP7 123 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 CXCR6O00574 342 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 ARPC2O15144 300 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 TPST1O60507 370 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 CDC40O60508 579 aaKnown RBP eCLIP6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 GCM2O75603 506 aaPredicted RBP6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 BCAS2O75934 225 aaPredicted RBP6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 SERPINA1P01009 418 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 TFPTP0C1Z6 253 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 CCL3P10147 92 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 ARAFP10398 606 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 ATP6V1C1P21283 382 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 TRHRP34981 398 aaPredicted RBP6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 CD96P40200 585 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 MNAT1P51948 309 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 HPCAP84074 193 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 BIKQ13323 160 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 DECR1Q16698 335 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 ST3GAL2Q16842 350 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 VMACQ2NL98 169 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 LACTB2Q53H82 288 aaPredicted RBP6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 PIGGQ5H8A4 983 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 PDZK1Q5T2W1 519 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 ABHD17BQ5VST6 288 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 TYW3Q6IPR3 259 aaKnown RBP6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 BHLHB9Q6PI77 547 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 INO80CQ6PI98 192 aaPredicted RBP6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 LYPD8Q6UX82 237 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 APOOLQ6UXV4 268 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 HACD2Q6Y1H2 254 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 FRRS1Q6ZNA5 592 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 OR5L2Q8NGL0 311 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 OR4C3Q8NH37 302 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 BTBD9Q96Q07 612 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 SDF2Q99470 211 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 WFDC6Q9BQY6 131 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 SLC38A1Q9H2H9 487 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 LRMDAQ9H2I8 198 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 ZNF552Q9H707 407 aaPredicted RBP6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 A4GALTQ9NPC4 353 aa6.95□□□□□ -1.3
SF3A3P1-201ENST00000446317 MRGBPQ9NV56 204 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms