RNA–Protein interactions for RNA: ENST00000444869.5

COMMD3-202, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 757 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-202ENST00000444869 ZIM3Q96PE6 472 aa12.8□□□□□ -0.36
COMMD3-202ENST00000444869 UCK2Q9BZX2 261 aa12.8□□□□□ -0.36
COMMD3-202ENST00000444869 Q9N2J8 555 aa12.8□□□□□ -0.36
COMMD3-202ENST00000444869 CBLCQ9ULV8 474 aa12.8□□□□□ -0.36
COMMD3-202ENST00000444869 ABCG2Q9UNQ0 655 aa12.8□□□□□ -0.36
COMMD3-202ENST00000444869 MRPS18CQ9Y3D5 142 aaKnown RBP12.8□□□□□ -0.36
COMMD3-202ENST00000444869 ACTL7BQ9Y614 415 aa12.8□□□□□ -0.36
COMMD3-202ENST00000444869 PDZD2O15018 2839 aa12.8□□□□□ -0.36
COMMD3-202ENST00000444869 DOCK7Q96N67 2140 aa12.8□□□□□ -0.36
COMMD3-202ENST00000444869 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 KDM4EB2RXH2 506 aaPredicted RBP12.79□□□□□ -0.36
COMMD3-202ENST00000444869 SCAMP2O15127 329 aaKnown RBP12.79□□□□□ -0.36
COMMD3-202ENST00000444869 ITM2AO43736 263 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 PEX11AO75192 247 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 SKAP2O75563 359 aaPredicted RBP12.79□□□□□ -0.36
COMMD3-202ENST00000444869 NKX2-2O95096 273 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 IL33O95760 270 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 SERPINE1P05121 402 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 PRPS2P11908 318 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 GRK2P25098 689 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 SRD5A2P31213 254 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 CEACAM8P31997 349 aaPredicted RBP12.79□□□□□ -0.36
COMMD3-202ENST00000444869 EVI2BP34910 448 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 RPL3P39023 403 aaKnown RBP12.79□□□□□ -0.36
COMMD3-202ENST00000444869 GFRA1P56159 465 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 MPP2Q14168 576 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 MLC1Q15049 377 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 TOMM20Q15388 145 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 ZNHIT3Q15649 155 aaPredicted RBP12.79□□□□□ -0.36
COMMD3-202ENST00000444869 DECR1Q16698 335 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 ATP6AP1LQ52LC2 224 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 EXOSC6Q5RKV6 272 aaKnown RBP12.79□□□□□ -0.36
COMMD3-202ENST00000444869 CEP85LQ5SZL2 805 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 NSUN5P2Q63ZY6 315 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 R3HCC1LQ7Z5L2 792 aaKnown RBP12.79□□□□□ -0.36
COMMD3-202ENST00000444869 WDR53Q7Z5U6 358 aaPredicted RBP12.79□□□□□ -0.36
COMMD3-202ENST00000444869 CROCCP2Q86T23 111 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 YRDCQ86U90 279 aaKnown RBP12.79□□□□□ -0.36
COMMD3-202ENST00000444869 LACC1Q8IV20 430 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 LIX1LQ8IVB5 337 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 OR10Q1Q8NGQ4 319 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 ABTB1Q969K4 478 aaPredicted RBP12.79□□□□□ -0.36
COMMD3-202ENST00000444869 GIMAP5Q96F15 307 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 C14orf79Q96F83 325 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 KCNJ16Q9NPI9 418 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 FAM120CQ9NX05 1096 aaKnown RBP12.79□□□□□ -0.36
COMMD3-202ENST00000444869 ALKBH4Q9NXW9 302 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 SH3BP4Q9P0V3 963 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 FBXL2Q9UKC9 423 aa12.79□□□□□ -0.36
COMMD3-202ENST00000444869 PCNX3Q9H6A9 2034 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 CD8B2A6NJW9 211 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 LYPLA1O75608 230 aaPredicted RBP12.78□□□□□ -0.36
COMMD3-202ENST00000444869 SNUPNO95149 360 aaKnown RBP12.78□□□□□ -0.36
COMMD3-202ENST00000444869 CPN1P15169 458 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 GPC1P35052 558 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 TIMP3P35625 211 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 HPCAL1P37235 193 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 MANFP55145 182 aaKnown RBP12.78□□□□□ -0.36
COMMD3-202ENST00000444869 PTGR1Q14914 329 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 CHI3L2Q15782 390 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 SLC25A35Q3KQZ1 300 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 MEX3BQ6ZN04 569 aaKnown RBP12.78□□□□□ -0.36
COMMD3-202ENST00000444869 FADS6Q8N9I5 356 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 CDRT4Q8N9R6 151 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 NAXEQ8NCW5 288 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 CEP70Q8NHQ1 597 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 PSMA8Q8TAA3 256 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 DTNBP1Q96EV8 351 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 MS4A4EQ96PG1 132 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 C20orf27Q9GZN8 174 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 SIRT3Q9NTG7 399 aaPredicted RBP12.78□□□□□ -0.36
COMMD3-202ENST00000444869 ASIC5Q9NY37 505 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 FLRT3Q9NZU0 649 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 HAO1Q9UJM8 370 aa12.78□□□□□ -0.36
COMMD3-202ENST00000444869 MRTO4Q9UKD2 239 aaKnown RBP12.78□□□□□ -0.36
COMMD3-202ENST00000444869 TACC2O95359 2948 aa12.77□□□□□ -0.36
COMMD3-202ENST00000444869 GXYLT2A0PJZ3 443 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 MBD3L4A6NDZ8 208 aaPredicted RBP12.77□□□□□ -0.37
COMMD3-202ENST00000444869 MBD3L3A6NE82 208 aaPredicted RBP12.77□□□□□ -0.37
COMMD3-202ENST00000444869 MBD3L5A6NJ08 208 aaPredicted RBP12.77□□□□□ -0.37
COMMD3-202ENST00000444869 HSPB2A8KAH6 182 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 C17orf51A8MQB3 221 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 ZWINTO95229 277 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 HSPA4LO95757 839 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 IGKV1D-16P01601 117 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 DDX5P17844 614 aaKnown RBP12.77□□□□□ -0.37
COMMD3-202ENST00000444869 SSTR2P30874 369 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 PSMD4P55036 377 aaKnown RBP12.77□□□□□ -0.37
COMMD3-202ENST00000444869 C21orf58P58505 322 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 ABCE1P61221 599 aaKnown RBP12.77□□□□□ -0.37
COMMD3-202ENST00000444869 SF3B4Q15427 424 aaKnown RBP eCLIP12.77□□□□□ -0.37
COMMD3-202ENST00000444869 HSPB2Q16082 182 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 SMU1Q2TAY7 513 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 VPS26BQ4G0F5 336 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 IL23RQ5VWK5 629 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 DMRTA1Q5VZB9 504 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 MFSD12Q6NUT3 480 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 POMZP3Q6PJE2 187 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 ADGRE4PQ86SQ3 457 aa12.77□□□□□ -0.37
COMMD3-202ENST00000444869 IFNEQ86WN2 208 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms