RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 MFSD12Q6NUT3 480 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 CDC73Q6P1J9 531 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 ZNF527Q8NB42 609 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 SARAFQ96BY9 339 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 FAM120BQ96EK7 910 aaKnown RBP11.24□□□□□ -0.61
LTBR-204ENST00000444814 PANX1Q96RD7 426 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 TBL1XR1Q9BZK7 514 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 SLCO1B3Q9NPD5 702 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 SDR39U1Q9NRG7 319 aaPredicted RBP11.24□□□□□ -0.61
LTBR-204ENST00000444814 TUBA8Q9NY65 449 aaPredicted RBP11.24□□□□□ -0.61
LTBR-204ENST00000444814 ZFHX4Q86UP3 3567 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 RNF103-CHMP3A0A140T963 221 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 G3V3Y1 287 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 H3BNH8 94 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 BCKDKO14874 412 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 SUSD5O60279 629 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 ZNF354AO60765 605 aaPredicted RBP11.24□□□□□ -0.61
LTBR-204ENST00000444814 EDF1O60869 148 aaKnown RBP11.24□□□□□ -0.61
LTBR-204ENST00000444814 ANP32DO95626 131 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 CPSF4O95639 269 aaKnown RBP11.24□□□□□ -0.61
LTBR-204ENST00000444814 ESRRAP11474 423 aaPredicted RBP11.24□□□□□ -0.61
LTBR-204ENST00000444814 MST1P26927 711 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 GDF1P27539 372 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 MAN2A2P49641 1150 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 MRPL49Q13405 166 aaKnown RBP11.24□□□□□ -0.61
LTBR-204ENST00000444814 GAB1Q13480 694 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 LASP1Q14847 261 aaKnown RBP11.24□□□□□ -0.61
LTBR-204ENST00000444814 TOMM20Q15388 145 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 PRSS53Q2L4Q9 553 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 C4orf17Q53FE4 359 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 SPANXN4Q5MJ08 99 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 HGDQ93099 445 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 RMND5BQ96G75 393 aaPredicted RBP11.24□□□□□ -0.61
LTBR-204ENST00000444814 ITCHQ96J02 903 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 SLC35G5Q96KT7 338 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 BTBD2Q9BX70 525 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 PIGUQ9H490 435 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 PTGES2Q9H7Z7 377 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 ANKRA2Q9H9E1 313 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 DEPPQ9NTK1 212 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 OSGIN2Q9Y236 505 aa11.24□□□□□ -0.61
LTBR-204ENST00000444814 NBEAQ8NFP9 2946 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 LOC400499M0QZD8 3231 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 LAMA5O15230 3695 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 TRGV8A0A0C4DH27 118 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 FAM234BA2RU67 622 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 FAM166BA8MTA8 275 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 FAM47E-STBD1D6RA91 191 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 RFXANKO14593 260 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 ANKRD28O15084 1053 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 TSPAN2O60636 221 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 SLC19A2O60779 497 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 UGT2B11O75310 529 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 CBR3O75828 277 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 GLSO94925 669 aaPredicted RBP11.23□□□□□ -0.61
LTBR-204ENST00000444814 KRT75O95678 551 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 HMGN2P05204 90 aaKnown RBP11.23□□□□□ -0.61
LTBR-204ENST00000444814 HNRNPCP07910 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
LTBR-204ENST00000444814 VIMP08670 466 aaKnown RBP11.23□□□□□ -0.61
LTBR-204ENST00000444814 STSP08842 583 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 ALDOCP09972 364 aaKnown RBP11.23□□□□□ -0.61
LTBR-204ENST00000444814 PTGS2P35354 604 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 RFX3P48380 749 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 MRPL19P49406 292 aaKnown RBP11.23□□□□□ -0.61
LTBR-204ENST00000444814 KHKP50053 298 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 IDH3AP50213 366 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 ATP4BP51164 291 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 POLR2JP52435 117 aaKnown RBP11.23□□□□□ -0.61
LTBR-204ENST00000444814 NME5P56597 212 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 UFM1P61960 85 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 HBA1P69905 142 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 HPCAP84074 193 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 SQLEQ14534 574 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.23□□□□□ -0.61
LTBR-204ENST00000444814 EIF2S3LQ2VIR3 472 aaKnown RBP11.23□□□□□ -0.61
LTBR-204ENST00000444814 METTL21CQ5VZV1 264 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 ANGPTL8Q6UXH0 198 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 NPSR1Q6W5P4 371 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 SPPL2CQ8IUH8 684 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 MISPQ8IVT2 679 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 SIAH3Q8IW03 269 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 TMEM251Q8N6I4 163 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 OIT3Q8WWZ8 545 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 EFHD2Q96C19 240 aaPredicted RBP11.23□□□□□ -0.61
LTBR-204ENST00000444814 CCDC115Q96NT0 180 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 REPIN1Q9BWE0 567 aaKnown RBP11.23□□□□□ -0.61
LTBR-204ENST00000444814 RAD21L1Q9H4I0 556 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 ZDHHC11Q9H8X9 412 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 CACYBPQ9HB71 228 aaKnown RBP11.23□□□□□ -0.61
LTBR-204ENST00000444814 ACKR4Q9NPB9 350 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 SIRT3Q9NTG7 399 aaPredicted RBP11.23□□□□□ -0.61
LTBR-204ENST00000444814 PPP4R1LQ9P1A2 415 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 WIF1Q9Y5W5 379 aa11.23□□□□□ -0.61
LTBR-204ENST00000444814 TRGV5A0A0B4J1U4 118 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 TMEM247A6NEH6 219 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 FIGNL2A6NMB9 653 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 SCDO00767 359 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 ICOSLGO75144 302 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 TRIM3O75382 744 aaPredicted RBP11.22□□□□□ -0.61
LTBR-204ENST00000444814 TRAPPC6AO75865 159 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms