RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ZIM3Q96PE6 472 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 CCT7Q99832 543 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 TUBA1CQ9BQE3 449 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 ZNF395Q9H8N7 513 aaPredicted RBP9.88□□□□□ -0.83
SF3A1-203ENST00000444440 TAS2R9Q9NYW1 312 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 ZDHHC2Q9UIJ5 367 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 L3MBTL1Q9Y468 752 aa9.88□□□□□ -0.83
SF3A1-203ENST00000444440 AHRRA9YTQ3 701 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 TM9SF1O15321 606 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 PDPK1O15530 556 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 ITM2AO43736 263 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 SCO2O43819 266 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 ZIC3O60481 467 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 LYPLA1O75608 230 aaPredicted RBP9.87□□□□□ -0.83
SF3A1-203ENST00000444440 BPGMP07738 259 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 ACP2P11117 423 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 BCKDHAP12694 445 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 IL12BP29460 328 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 SSTR2P30874 369 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 EVI2BP34910 448 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 LHX2P50458 406 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 AGFG1P52594 562 aaKnown RBP9.87□□□□□ -0.83
SF3A1-203ENST00000444440 PNLIPRP2P54317 469 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 B3GALT5-AS1P59052 145 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 APOOLQ6UXV4 268 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 ZAR1Q86SH2 424 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 GALNT10Q86SR1 603 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 EXOC3L1Q86VI1 746 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 PLCZ1Q86YW0 608 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 DDIASQ8IXT1 998 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 CLYBLQ8N0X4 340 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 FADS6Q8N9I5 356 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 FBXO30Q8TB52 745 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 PIK3R3Q92569 461 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 TMCO6Q96DC7 493 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 OTUB1Q96FW1 271 aaPredicted RBP9.87□□□□□ -0.83
SF3A1-203ENST00000444440 PGM2Q96G03 612 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 TRIB1Q96RU8 372 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 SH3GL2Q99962 352 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 KLHDC3Q9BQ90 382 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 LMF2Q9BU23 707 aaKnown RBP9.87□□□□□ -0.83
SF3A1-203ENST00000444440 REEP4Q9H6H4 257 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 RUBCNLQ9H714 662 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 KCNK9Q9NPC2 374 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 EQTNQ9NQ60 294 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 DDX18Q9NVP1 670 aaKnown RBP9.87□□□□□ -0.83
SF3A1-203ENST00000444440 CBLCQ9ULV8 474 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 TRAF6Q9Y4K3 522 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 ACTL7BQ9Y614 415 aa9.87□□□□□ -0.83
SF3A1-203ENST00000444440 TEP1Q99973 2627 aaKnown RBP9.87□□□□□ -0.83
SF3A1-203ENST00000444440 MBD3L4A6NDZ8 208 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-203ENST00000444440 MBD3L3A6NE82 208 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-203ENST00000444440 MBD3L5A6NJ08 208 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-203ENST00000444440 BIRC5O15392 142 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 TBX19O60806 448 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 ABCB7O75027 752 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 COQ9O75208 318 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 SKAP2O75563 359 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-203ENST00000444440 CBR3O75828 277 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 ZWINTO95229 277 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 NEFHP12036 1026 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 POU3F2P20265 443 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-203ENST00000444440 BMP5P22003 454 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 SRD5A2P31213 254 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 TIMP3P35625 211 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 CLDN18P56856 261 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 SRYQ05066 204 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 FOXF2Q12947 444 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 STX5Q13190 355 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 EFR3AQ14156 821 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 FREM1Q5H8C1 2179 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 EXOSC6Q5RKV6 272 aaKnown RBP9.86□□□□□ -0.83
SF3A1-203ENST00000444440 NSUN5P2Q63ZY6 315 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 ADGRE4PQ86SQ3 457 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 LACC1Q8IV20 430 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 TRIM42Q8IWZ5 723 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 OR2M3Q8NG83 312 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 OR7A2PQ8NGA2 310 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 OR14L1PQ8NHC6 308 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 MBD3L2Q8NHZ7 208 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-203ENST00000444440 NRGNQ92686 78 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 HOXB13Q92826 284 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-203ENST00000444440 ZNF764Q96H86 408 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-203ENST00000444440 C1orf50Q9BV19 199 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 C20orf27Q9GZN8 174 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 MCCC2Q9HCC0 563 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 SIRT3Q9NTG7 399 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-203ENST00000444440 FBXO34Q9NWN3 711 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 TAS2R10Q9NYW0 307 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 MED11Q9P086 117 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 RPH3AQ9Y2J0 694 aaPredicted RBP9.86□□□□□ -0.83
SF3A1-203ENST00000444440 OR10H1Q9Y4A9 318 aa9.86□□□□□ -0.83
SF3A1-203ENST00000444440 CCDC168Q8NDH2 2452 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 SPG11Q96JI7 2443 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 ANKHD1Q8IWZ3 2542 aaKnown RBP9.85□□□□□ -0.83
SF3A1-203ENST00000444440 CD8B2A6NJW9 211 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 ENO4A6NNW6 628 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 HSPB2A8KAH6 182 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 SHISA8B8ZZ34 492 aa9.85□□□□□ -0.83
SF3A1-203ENST00000444440 H0YC42 278 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms