RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 SLC35G5Q96KT7 338 aa9.93□□□□□ -0.82
HDAC6-211ENST00000443563 JSRP1Q96MG2 331 aaPredicted RBP9.93□□□□□ -0.82
HDAC6-211ENST00000443563 BTBD2Q9BX70 525 aa9.93□□□□□ -0.82
HDAC6-211ENST00000443563 ZDHHC11Q9H8X9 412 aa9.93□□□□□ -0.82
HDAC6-211ENST00000443563 PROK2Q9HC23 129 aa9.93□□□□□ -0.82
HDAC6-211ENST00000443563 SDHAF3Q9NRP4 125 aa9.93□□□□□ -0.82
HDAC6-211ENST00000443563 GPATCH2Q9NW75 528 aa9.93□□□□□ -0.82
HDAC6-211ENST00000443563 DCTN4Q9UJW0 460 aa9.93□□□□□ -0.82
HDAC6-211ENST00000443563 RELNP78509 3460 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 A0A0G2JMM0 328 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 A0A1W2PPB8 328 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 A0A1W2PRS3 328 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 PINLYPA6NC86 204 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 CCDC154A6NI56 674 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 FAM166BA8MTA8 275 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 KIR3DP1A8MWS1 328 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 RFXANKO14593 260 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 CDC40O60508 579 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDAC6-211ENST00000443563 KCNK2O95069 426 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 ANP32DO95626 131 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 AK1P00568 194 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 CYP4B1P13584 511 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 ATP6V1C1P21283 382 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 MAGEA8P43361 318 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 RFX3P48380 749 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 CASP6P55212 293 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 MRPL49Q13405 166 aaKnown RBP9.92□□□□□ -0.82
HDAC6-211ENST00000443563 DUSP5Q16690 384 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDAC6-211ENST00000443563 CMPK2Q5EBM0 449 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 RNFT1Q5M7Z0 435 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 EXOSC6Q5RKV6 272 aaKnown RBP9.92□□□□□ -0.82
HDAC6-211ENST00000443563 ATAD3BQ5T9A4 648 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 ARHGAP11AQ6P4F7 1023 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 ZNF621Q6ZSS3 439 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 TMEM251Q8N6I4 163 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 FBXO30Q8TB52 745 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 PRR7Q8TB68 274 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 FAM110BQ8TC76 370 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 MIPOL1Q8TD10 442 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 RNF138Q8WVD3 245 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 PIK3R3Q92569 461 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 NTNG2Q96CW9 530 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 NEURL3Q96EH8 262 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 THOC1Q96FV9 657 aaKnown RBP9.92□□□□□ -0.82
HDAC6-211ENST00000443563 NODALQ96S42 347 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 SLC35A5Q9BS91 424 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 YIPF4Q9BSR8 244 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 TSPAN10Q9H1Z9 355 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-211ENST00000443563 EXD2Q9NVH0 621 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 FGFR1OP2Q9NVK5 253 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 CCDC167Q9P0B6 97 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 WIF1Q9Y5W5 379 aa9.92□□□□□ -0.82
HDAC6-211ENST00000443563 NUP214P35658 2090 aaPredicted RBP9.92□□□□□ -0.82
HDAC6-211ENST00000443563 NINQ8N4C6 2090 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 GXYLT2A0PJZ3 443 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 C9JVG2 144 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 PYCARD-AS1I3L0S3 204 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 SNPHO15079 494 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 SUSD5O60279 629 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 HCN1O60741 890 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 CBR3O75828 277 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 UTS2O95399 124 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 KRT75O95678 551 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 IGHG3P01860 377 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 NGFRP08138 427 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 ZCCHC18P0CG32 403 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 HPGDP15428 266 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 ABOP16442 354 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 GDF1P27539 372 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 EVI2BP34910 448 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 MAGEA5P43359 124 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 UQCRFS1P47985 274 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 TRPC1P48995 793 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 MAN2A2P49641 1150 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 KHKP50053 298 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 ARFIP2P53365 341 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 RCAN2Q14206 197 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 EIF2S3LQ2VIR3 472 aaKnown RBP9.91□□□□□ -0.82
HDAC6-211ENST00000443563 TIGD2Q4W5G0 525 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 AGKQ53H12 422 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 SAXO2Q658L1 398 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 BICRALQ6AI39 1079 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 TIGD3Q6B0B8 471 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 ANGPTL8Q6UXH0 198 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 EID3Q8N140 333 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 ZNF527Q8NB42 609 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 OR52N2Q8NGI0 321 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 OR9I1Q8NGQ6 314 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 CDS1Q92903 461 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 OR7D2Q96RA2 312 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 TMEM120AQ9BXJ8 343 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 TBL1XR1Q9BZK7 514 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 HOXD1Q9GZZ0 328 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 DEFB127Q9H1M4 99 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 LDAHQ9H6V9 325 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 ZNF703Q9H7S9 590 aaPredicted RBP9.91□□□□□ -0.82
HDAC6-211ENST00000443563 ACKR4Q9NPB9 350 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 UBQLN4Q9NRR5 601 aa9.91□□□□□ -0.82
HDAC6-211ENST00000443563 PLSCR2Q9NRY7 297 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms