RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 PNLIPRP2P54317 469 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 TECRLQ5HYJ1 363 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 PPP4R4Q6NUP7 873 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 KLC3Q6P597 504 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 STAC2Q6ZMT1 411 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 RPS27LQ71UM5 84 aaKnown RBP11.49□□□□□ -0.57
TRIM13-205ENST00000442421 CCDC25Q86WR0 208 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 SLC44A2Q8IWA5 706 aaPredicted RBP11.49□□□□□ -0.57
TRIM13-205ENST00000442421 CTAGE4Q8IX94 777 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 C1orf52Q8N6N3 182 aaKnown RBP11.49□□□□□ -0.57
TRIM13-205ENST00000442421 ZNF611Q8N823 705 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 OR4F6Q8NGB9 312 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 OR9A2Q8NGT5 310 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 ZNF675Q8TD23 568 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 AKAP1Q92667 903 aaKnown RBP eCLIP11.49□□□□□ -0.57
TRIM13-205ENST00000442421 HBEGFQ99075 208 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 NTMT1Q9BV86 223 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 FAIM2Q9BWQ8 316 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 FOLH1BQ9HBA9 442 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 GRHL1Q9NZI5 618 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 FLRT3Q9NZU0 649 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 WHRNQ9P202 907 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 CLEC4AQ9UMR7 237 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 ALPK2Q86TB3 2170 aa11.49□□□□□ -0.57
TRIM13-205ENST00000442421 UQCRHLA0A096LP55 91 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 A0A096LPK6 155 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 CCDC189A1A4V9 331 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 SHISA8B8ZZ34 492 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 ZSCAN12O43309 604 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 BCAS2O75934 225 aaPredicted RBP11.48□□□□□ -0.57
TRIM13-205ENST00000442421 ESRRBO95718 433 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 TP53P04637 393 aaPredicted RBP11.48□□□□□ -0.57
TRIM13-205ENST00000442421 PPP3CBP16298 524 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 STX2P32856 288 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 SLC6A8P48029 635 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 RPS4XP62701 263 aaKnown RBP11.48□□□□□ -0.57
TRIM13-205ENST00000442421 ERCC6LQ2NKX8 1250 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 SH2D4BQ5SQS7 431 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 ALKBH2Q6NS38 261 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 METTL2BQ6P1Q9 378 aaKnown RBP11.48□□□□□ -0.57
TRIM13-205ENST00000442421 PODNL1Q6PEZ8 512 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 CCDC91Q7Z6B0 441 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 PLD6Q8N2A8 252 aaKnown RBP11.48□□□□□ -0.57
TRIM13-205ENST00000442421 ERP44Q9BS26 406 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 TMEM204Q9BSN7 226 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 REG4Q9BYZ8 158 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 RTN4RQ9BZR6 473 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 STMN4Q9H169 189 aaPredicted RBP11.48□□□□□ -0.57
TRIM13-205ENST00000442421 OR10H1Q9Y4A9 318 aa11.48□□□□□ -0.57
TRIM13-205ENST00000442421 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.47□□□□□ -0.575e-9■■■■□ 20.9
TRIM13-205ENST00000442421 PPP6CO00743 305 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 GMFGO60234 142 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 FADS1O60427 444 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 TMCC2O75069 709 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 IFNA2P01563 188 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 ALDOAP04075 364 aaKnown RBP11.47□□□□□ -0.57
TRIM13-205ENST00000442421 IL3P08700 152 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 FCGR2AP12318 317 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 PAFAH1B1P43034 410 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 MAGEA4P43358 317 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 RPS3AP61247 264 aaKnown RBP11.47□□□□□ -0.57
TRIM13-205ENST00000442421 ZNF155Q12901 538 aaPredicted RBP11.47□□□□□ -0.57
TRIM13-205ENST00000442421 NAB1Q13506 487 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 GANABQ14697 944 aaKnown RBP11.47□□□□□ -0.57
TRIM13-205ENST00000442421 UAP1Q16222 522 aaPredicted RBP11.47□□□□□ -0.57
TRIM13-205ENST00000442421 SGCBQ16585 318 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 GGTA1PQ4G0N0 100 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 LETMD1Q6P1Q0 360 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 MILR1Q7Z6M3 343 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 GGNQ86UU5 652 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 METTL25Q8N6Q8 603 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 OR7G2Q8NG99 324 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 OR6K3Q8NGY3 331 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 UHMK1Q8TAS1 419 aaKnown RBP11.47□□□□□ -0.57
TRIM13-205ENST00000442421 RAB3IL1Q8TBN0 382 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 SELENOMQ8WWX9 145 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 GFM2Q969S9 779 aaKnown RBP11.47□□□□□ -0.57
TRIM13-205ENST00000442421 EXOSC8Q96B26 276 aaKnown RBP11.47□□□□□ -0.57
TRIM13-205ENST00000442421 MTBPQ96DY7 904 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 PRRG4Q9BZD6 226 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 ACTR6Q9GZN1 396 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 VPS11Q9H270 941 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 YAE1D1Q9NRH1 226 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 PLSCR4Q9NRQ2 329 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 EMC9Q9Y3B6 208 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 SAR1BQ9Y6B6 198 aa11.47□□□□□ -0.57
TRIM13-205ENST00000442421 SVEP1Q4LDE5 3571 aa11.46□□□□□ -0.57
TRIM13-205ENST00000442421 LINC01387J3KSC0 135 aa11.46□□□□□ -0.57
TRIM13-205ENST00000442421 EIF1AYO14602 144 aaKnown RBP11.46□□□□□ -0.57
TRIM13-205ENST00000442421 RAD51CO43502 376 aa11.46□□□□□ -0.57
TRIM13-205ENST00000442421 PLGP00747 810 aaPredicted RBP11.46□□□□□ -0.57
TRIM13-205ENST00000442421 TSPAN8P19075 237 aa11.46□□□□□ -0.57
TRIM13-205ENST00000442421 TYK2P29597 1187 aa11.46□□□□□ -0.57
TRIM13-205ENST00000442421 ACVR1BP36896 505 aa11.46□□□□□ -0.57
TRIM13-205ENST00000442421 CDKN1AP38936 164 aa11.46□□□□□ -0.57
TRIM13-205ENST00000442421 EIF1AXP47813 144 aaKnown RBP11.46□□□□□ -0.57
TRIM13-205ENST00000442421 SERPINB8P50452 374 aa11.46□□□□□ -0.57
TRIM13-205ENST00000442421 PLTPP55058 493 aa11.46□□□□□ -0.57
TRIM13-205ENST00000442421 CTBP2P56545 445 aa11.46□□□□□ -0.57
TRIM13-205ENST00000442421 MRPS22P82650 360 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms