RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 PAPD5Q8NDF8 572 aaKnown RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 OR5H6Q8NGV6 325 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 FANK1Q8TC84 345 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 S100ZQ8WXG8 99 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 LRTOMTQ8WZ04 291 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 RNF145Q96MT1 663 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 OSBPL11Q9BXB4 747 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 RBCK1Q9BYM8 510 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 THUMPD1Q9NXG2 353 aaKnown RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 SAMD4AQ9UPU9 718 aaKnown RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 UGT2A1Q9Y4X1 527 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF749O43361 778 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 PRKD3O94806 890 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 RAP2AP10114 183 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ARAFP10398 606 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 DBTP11182 482 aaKnown RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 HOXB6P17509 224 aaKnown RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 FASP25445 335 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 OPRL1P41146 370 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ARHGDIBP52566 201 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 LTB4RQ15722 352 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ESCO2Q56NI9 601 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 ZC3H7AQ8IWR0 971 aaKnown RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 SLC30A8Q8IWU4 369 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 PM20D2Q8IYS1 436 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 SHISA5Q8N114 240 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 HORMAD2Q8N7B1 307 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 RCBTB1Q8NDN9 531 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 OR51Q1Q8NH59 317 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 KAT2AQ92830 837 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 CCDC74BQ96LY2 380 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 CHID1Q9BWS9 393 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 DHCR7Q9UBM7 475 aaKnown RBP7.56□□□□□ -1.2
CCDC39-201ENST00000442201 TRPC4Q9UBN4 977 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 RPS6KA6Q9UK32 745 aa7.56□□□□□ -1.2
CCDC39-201ENST00000442201 FAM25AB3EWG3 89 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 FAM25CB3EWG5 89 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 FAM25GB3EWG6 89 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 PLOD2O00469 737 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF682O95780 498 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 ATP1B1P05026 303 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 HMGN2P05204 90 aaKnown RBP7.55□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF806P0C7X5 589 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 NT5EP21589 574 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 AQP1P29972 269 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 CD83Q01151 205 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 SLC13A2Q13183 592 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 LASP1Q14847 261 aaKnown RBP7.55□□□□□ -1.2
CCDC39-201ENST00000442201 SYT16Q17RD7 645 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 PHF19Q5T6S3 580 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 ERMP1Q7Z2K6 904 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 NUP43Q8NFH3 380 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 NFKBIDQ8NI38 313 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 RAB8BQ92930 207 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 ANKRD9Q96BM1 317 aaPredicted RBP7.55□□□□□ -1.2
CCDC39-201ENST00000442201 SGK3Q96BR1 496 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 OMA1Q96E52 524 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 ZNF578Q96N58 590 aaPredicted RBP7.55□□□□□ -1.2
CCDC39-201ENST00000442201 BTBD2Q9BX70 525 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 FANCFQ9NPI8 374 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 PRTFDC1Q9NRG1 225 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 EIF3KQ9UBQ5 218 aaKnown RBP7.55□□□□□ -1.2
CCDC39-201ENST00000442201 FTSJ1Q9UET6 329 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 SRPK3Q9UPE1 567 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 ANGPT4Q9Y264 503 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 AUP1Q9Y679 476 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 USP34Q70CQ2 3546 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 C5orf58C9J3I9 102 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 D6RAR5 112 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 OR10H2O60403 315 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 CTNSO60931 367 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 GP1BAP07359 652 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 SLC35E2P0CK97 266 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 CCNA2P20248 432 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 MATN1P21941 496 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 XCR1P46094 333 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 KHKP50053 298 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 STX4Q12846 297 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 RAB39AQ14964 217 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 SF3A2Q15428 464 aaKnown RBP7.55□□□□□ -1.2
CCDC39-201ENST00000442201 PRAMEF17Q5VTA0 474 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 ENPP6Q6UWR7 440 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 MFSD4AQ8N468 514 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 FAM86B1Q8N7N1 296 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 TMEM102Q8N9M5 508 aaPredicted RBP7.55□□□□□ -1.2
CCDC39-201ENST00000442201 OR6F1Q8NGZ6 308 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 FAM110BQ8TC76 370 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 PYURFQ96I23 114 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 ASPSCR1Q9BZE9 553 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 ADNPQ9H2P0 1102 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 OR51I1Q9H343 314 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 A4GALTQ9NPC4 353 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 PTGFRNQ9P2B2 879 aa7.55□□□□□ -1.2
CCDC39-201ENST00000442201 TMEM184BQ9Y519 407 aaPredicted RBP7.55□□□□□ -1.2
CCDC39-201ENST00000442201 NUP214P35658 2090 aaPredicted RBP7.55□□□□□ -1.2
CCDC39-201ENST00000442201 A0A1B0GX78 115 aa7.54□□□□□ -1.2
CCDC39-201ENST00000442201 ISPDA4D126 451 aa7.54□□□□□ -1.2
CCDC39-201ENST00000442201 OR6C65A6NJZ3 312 aa7.54□□□□□ -1.2
CCDC39-201ENST00000442201 LINC01387J3KSC0 135 aa7.54□□□□□ -1.2
CCDC39-201ENST00000442201 HMGN4O00479 90 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms