RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 ABCD2Q9UBJ2 740 aa5.49□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 DDX60LQ5H9U9 1706 aaKnown RBP5.49□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ADGRA3Q8IWK6 1321 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PRAMEF33A0A0G2JMD5 474 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CLEC18AA5D8T8 446 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ZNF98A6NK75 572 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 A8MU76 341 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CTDSPLO15194 276 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 STX7O15400 261 aaKnown RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PLRG1O43660 514 aaKnown RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PRAMEF10O60809 474 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 EDF1O60869 148 aaKnown RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TM7SF2O76062 418 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 NKX2-2O95096 273 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CREB1P16220 341 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 HOXB9P17482 250 aaPredicted RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 FOXN2P32314 431 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 EIF2S3P41091 472 aaKnown RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CAPZBP47756 277 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 OR3A3P47888 321 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 NKX2-5P52952 324 aaPredicted RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ESRRGP62508 458 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 HSD11B2P80365 405 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 IRF8Q02556 426 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CHRNB3Q05901 458 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TFDP1Q14186 410 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 RNPS1Q15287 305 aaKnown RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 RNF151Q2KHN1 245 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ZBED5Q49AG3 693 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 SLC9C1Q4G0N8 1177 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CBWD6Q4V339 395 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CBWD3Q5JTY5 395 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 OGFRL1Q5TC84 451 aaPredicted RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PRAMEF7Q5VXH5 474 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PMS2CLQ68D20 193 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TMEM220Q6QAJ8 160 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 FIGLAQ6QHK4 219 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CLEC18BQ6UXF7 455 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CFAP77Q6ZQR2 320 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PRSS45Q7RTY3 260 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PID1Q7Z2X4 250 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 C16orf62Q7Z3J2 963 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 LHFPL4Q7Z7J7 247 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TMPRSS6Q8IU80 811 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ADGRG5Q8IZF4 528 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PDIK1LQ8N165 341 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PCDH20Q8N6Y1 951 aaKnown RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CLEC18CQ8NCF0 446 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TMEM104Q8NE00 496 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 C9orf43Q8TAL5 461 aaPredicted RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 S100PBPQ96BU1 408 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ISOC1Q96CN7 298 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 RNF145Q96MT1 663 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 HSD17B14Q9BPX1 270 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 C1orf50Q9BV19 199 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TPSD1Q9BZJ3 242 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 COA1Q9GZY4 146 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 WDR55Q9H6Y2 383 aaPredicted RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 MAGEF1Q9HAY2 307 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 HHATLQ9HCP6 504 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 MKKSQ9NPJ1 570 aaPredicted RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TIGARQ9NQ88 270 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 THUMPD1Q9NXG2 353 aaKnown RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 MYEF2Q9P2K5 600 aaKnown RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 RHCGQ9UBD6 479 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ADAM29Q9UKF5 820 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 FLVCR2Q9UPI3 526 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 FOCADQ5VW36 1801 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 SNED1Q8TER0 1413 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 A0A1B0GVM2 712 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 MBLAC1A4D2B0 266 aaPredicted RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 FABP12A6NFH5 140 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ARHGEF33A8MVX0 844 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 FAM25AB3EWG3 89 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 FAM25CB3EWG5 89 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 FAM25GB3EWG6 89 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 C9JVG2 144 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 NPIPB8E9PQR5 432 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 IFNL4K9M1U5 179 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TOX3O15405 576 aaPredicted RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 NME2P1O60361 137 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 SNAP91O60641 907 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CCNKO75909 580 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 GPANK1O95872 356 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 MT-ND1P03886 318 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PRNPP04156 253 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ERBB2P04626 1255 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 DBTP11182 482 aaKnown RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 PPP3CBP16298 524 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 ZNF26P17031 533 aaPredicted RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 XRCC1P18887 633 aaPredicted RBP5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 MSH3P20585 1137 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 GSTM3P21266 225 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CDAP32320 146 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 CYP2C18P33260 490 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 TALDO1P37837 337 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 NR4A2P43354 598 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 OMPP47874 163 aa5.48□□□□□ -1.53
ALMS1-IT1-201ENST00000441587 SUOXP51687 545 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms