RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 CD244Q9BZW8 370 aa11.02□□□□□ -0.64
CCBE1-202ENST00000439986 ZDHHC3Q9NYG2 299 aa11.02□□□□□ -0.64
CCBE1-202ENST00000439986 TAS2R10Q9NYW0 307 aa11.02□□□□□ -0.64
CCBE1-202ENST00000439986 TBC1D29Q9UFV1 150 aa11.02□□□□□ -0.64
CCBE1-202ENST00000439986 EDNRBP24530 442 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 SMSP52788 366 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 PTCHD3Q3KNS1 767 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 SLC36A3Q495N2 470 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 LRRTM4Q86VH4 590 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 ALDH16A1Q8IZ83 802 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 OR6N1Q8NGY5 312 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 DYNC2LI1Q8TCX1 351 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 EXTL1Q92935 676 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 SPXQ9BT56 116 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 PBDC1Q9BVG4 233 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 BTBD1Q9H0C5 482 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 KCNH6Q9H252 994 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 DNAJC5Q9H3Z4 198 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 DNAJC27Q9NZQ0 273 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 ASB4Q9Y574 426 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 NUAK1O60285 661 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 RFPL2O75678 378 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 SLITRK5O94991 958 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 CSF2P04141 144 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 TAP2Q03519 686 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 ABRAXAS2Q15018 415 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 RNF212Q495C1 297 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 CYBRD1Q53TN4 286 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 IDO2Q6ZQW0 420 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 UMODL1-AS1Q8N2C9 162 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 DTWD1Q8N5C7 304 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 NLGN4YQ8NFZ3 816 aaPredicted RBP11.02□□□□□ -0.65
CCBE1-202ENST00000439986 SUSD3Q96L08 255 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 DNTTIP1Q9H147 329 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 ZDHHC4Q9NPG8 344 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 NUDT15Q9NV35 164 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 KAT7O95251 611 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 SFTPCP11686 197 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 CSNK2A2P19784 350 aaPredicted RBP11.02□□□□□ -0.65
CCBE1-202ENST00000439986 PCSK6P29122 969 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 GNRHRP30968 328 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 TPMTP51580 245 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 PPP5CP53041 499 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 ALG10Q5BKT4 473 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 CMTM8Q8IZV2 173 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 TRIB1Q96RU8 372 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 MAPKAP1Q9BPZ7 522 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 ELOVL1Q9BW60 279 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 NAA50Q9GZZ1 169 aaKnown RBP11.02□□□□□ -0.65
CCBE1-202ENST00000439986 SLC26A1Q9H2B4 701 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 OR51I1Q9H343 314 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 GOLGA4Q13439 2230 aaKnown RBP11.02□□□□□ -0.65
CCBE1-202ENST00000439986 C20orf202A1L168 122 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 SOX1O00570 391 aaPredicted RBP11.02□□□□□ -0.65
CCBE1-202ENST00000439986 GLAP06280 429 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 MAGEA11P43364 429 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 INHBCP55103 352 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 FXYD6P3P58550 94 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 ZNF124Q15973 351 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 DHRS9Q9BPW9 319 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 SCML2Q9UQR0 700 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 YIPF1Q9Y548 306 aa11.02□□□□□ -0.65
CCBE1-202ENST00000439986 A0A0D9SEW6 157 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 A0A1B0GV50 99 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 AKR7A2O43488 359 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 AK1P00568 194 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 RNF130Q86XS8 419 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 TRAM1L1Q8N609 369 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 MAB21L2Q9Y586 359 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 N4BP2Q86UW6 1770 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-202ENST00000439986 TCRBV21S2A2A0A5A6 115 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 UPK3BL1B0FP48 263 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 UPK3BL2E5RIL1 263 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 TLX2O43763 284 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-202ENST00000439986 ZNF26P17031 533 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-202ENST00000439986 NDUFS1P28331 727 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 CDK6Q00534 326 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 METAP1DQ6UB28 335 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-202ENST00000439986 LARP4Q71RC2 724 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCBE1-202ENST00000439986 UTP23Q9BRU9 249 aaKnown RBP11.01□□□□□ -0.65
CCBE1-202ENST00000439986 ASPNQ9BXN1 380 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 SLCO1B1Q9Y6L6 691 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 PLCH1Q4KWH8 1693 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 TNFSF12O43508 249 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 HOXB2P14652 356 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 PNLIPRP1P54315 467 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 KCNC4Q03721 635 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 PLPP6Q8IY26 295 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 KDM8Q8N371 416 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 C3orf30Q96M34 536 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 PTCHD1Q96NR3 888 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 NECAB3Q96P71 396 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-202ENST00000439986 MS4A12Q9NXJ0 267 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 HCN2Q9UL51 889 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 TJP1Q07157 1748 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 ZNF705GA8MUZ8 300 aaPredicted RBP11.01□□□□□ -0.65
CCBE1-202ENST00000439986 SCO2O43819 266 aa11.01□□□□□ -0.65
CCBE1-202ENST00000439986 H1F0P07305 194 aaKnown RBP11.01□□□□□ -0.65
CCBE1-202ENST00000439986 BCKDHAP12694 445 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 216.4 ms