RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 HTR1EP28566 365 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 EVI2BP34910 448 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 PTGER4P35408 488 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 DCTP40126 519 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 CLDN8P56748 225 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 ZNF630Q2M218 657 aaPredicted RBP22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 RIMKLAQ8IXN7 391 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 WDSUB1Q8N9V3 476 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 GPR151Q8TDV0 419 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 CA5BP1Q8WTZ4 195 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 ASB5Q8WWX0 329 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 MEAF6Q9HAF1 191 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 SERHLQ9NQF3 203 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 ZCCHC3Q9NUD5 404 aaKnown RBP22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 ARGLU1Q9NWB6 273 aaPredicted RBP22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 NCKAP5O14513 1909 aa22.56■■□□□ 1.2
RAPGEF1-206ENST00000438647 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 NKX2-2O95096 273 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 EFNA1P20827 205 aaPredicted RBP22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 PRIM2P49643 509 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 CLK3P49761 638 aaKnown RBP22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 NHSL2Q5HYW2 709 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 MFSD12Q6NUT3 480 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 CAMKMTQ7Z624 323 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 PM20D2Q8IYS1 436 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 MARVELD2Q8N4S9 558 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 FAM83FQ8NEG4 500 aaPredicted RBP22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 SLC9A6Q92581 669 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 FAM120BQ96EK7 910 aaKnown RBP22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 GIMAP5Q96F15 307 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 DUSP26Q9BV47 211 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 SDHAF3Q9NRP4 125 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 PNPOQ9NVS9 261 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 FAM120CQ9NX05 1096 aaKnown RBP22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 ALKBH4Q9NXW9 302 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 SNX8Q9Y5X2 465 aa22.55■■□□□ 1.2
RAPGEF1-206ENST00000438647 UNC79Q9P2D8 2635 aa22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 CYSRT1A8MQ03 144 aa22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 FAM47E-STBD1D6RA91 191 aa22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 SNNO75324 88 aaPredicted RBP22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 LBPP18428 481 aa22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 CHRNB4P30926 498 aa22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 MAP3K8P41279 467 aa22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 RFX3P48380 749 aa22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 CRYZQ08257 329 aaKnown RBP22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 PMPCAQ10713 525 aa22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 SF3B4Q15427 424 aaKnown RBP eCLIP22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 EIPR1Q53HC9 387 aa22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 C1orf185Q5T7R7 199 aa22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 SP5Q6BEB4 398 aaPredicted RBP22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 RPRMLQ8N4K4 120 aa22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 PSMA8Q8TAA3 256 aa22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 RMND5BQ96G75 393 aaPredicted RBP22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 MANSC1Q9H8J5 431 aa22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 SIRT3Q9NTG7 399 aaPredicted RBP22.54■■□□□ 1.2
RAPGEF1-206ENST00000438647 SLCO1B7G3V0H7 640 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 ALOX5P09917 674 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 DIO3P55073 304 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 NUP107P57740 925 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 WIPI1Q5MNZ9 446 aaPredicted RBP22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 ZNF787Q6DD87 383 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 ULK2Q8IYT8 1036 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 OR56A1Q8NGH5 318 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 OR14L1PQ8NHC6 308 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 PIK3R3Q92569 461 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 TIMP4Q99727 224 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 TTYH2Q9BSA4 534 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 DPY30Q9C005 99 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 OR2B2Q9GZK3 357 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 PPP4R1LQ9P1A2 415 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 SLC6A5Q9Y345 797 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 FAM215AQ9Y5M1 114 aa22.53■■□□□ 1.2
RAPGEF1-206ENST00000438647 FREM3P0C091 2139 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 GXYLT2A0PJZ3 443 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 TRPC5OSA6NMA1 111 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 AHRRA9YTQ3 701 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 HDAC3O15379 428 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 CFLARO15519 480 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 HNRNPRO43390 633 aaKnown RBP22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 FADS1O60427 444 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 SOX30O94993 753 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 C6orf47O95873 294 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 ACTL6AO96019 429 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 SRD5A2P31213 254 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 CCT3P49368 545 aaKnown RBP22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 GAS1P54826 345 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 PGS1Q32NB8 556 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 SPDYE7PQ495Y7 208 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 VASNQ6EMK4 673 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 OGFOD2Q6N063 350 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 YRDCQ86U90 279 aaKnown RBP22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 SLC16A11Q8NCK7 471 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 OR4K17Q8NGC6 315 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 JADE3Q92613 823 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 ABTB1Q969K4 478 aaPredicted RBP22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 MOAP1Q96BY2 351 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 RUBCNLQ9H714 662 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 HHATLQ9HCP6 504 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 RNF6Q9Y252 685 aa22.52■■□□□ 1.2
RAPGEF1-206ENST00000438647 PHF3Q92576 2039 aaKnown RBP22.52■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms