RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 RBFOX1Q9NWB1 397 aaKnown RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 OR1A2Q9Y585 309 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ZFC3H1O60293 1989 aaKnown RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 COL11A1P12107 1806 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 PTPRFP10586 1907 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 IQCMA0A1B0GVH7 501 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 A0A1B0GVT2 93 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 SLC5A10A0PJK1 596 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ZSCAN5BA6NJL1 495 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ZAR1LA6NP61 321 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 LATO43561 262 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 TRIM3O75382 744 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 HTR1AP08908 422 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 RNF144AP50876 292 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 RPS25P62851 125 aaKnown RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ADAM8P78325 824 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 POU4F2Q12837 409 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 MBTPS1Q14703 1052 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 LRIT3Q3SXY7 679 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF385BQ569K4 471 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 CCDC157Q569K6 752 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 RNF165Q6ZSG1 346 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 DOK4Q8TEW6 326 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 FCAMRQ8WWV6 532 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 TCEAL4Q96EI5 215 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 SIPA1Q96FS4 1042 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF582Q96NG8 517 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 OR2M4Q96R27 311 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ZIC5Q96T25 663 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 THAP7Q9BT49 309 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 DPCDQ9BVM2 203 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 DPH1Q9BZG8 443 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 TRIM2Q9C040 744 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 C11orf54Q9H0W9 315 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 A4GALTQ9NPC4 353 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF226Q9NYT6 803 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 UBQLN2Q9UHD9 624 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 MGAT4AQ9UM21 535 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 GXYLT2A0PJZ3 443 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 FAM183AA6NL82 134 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 BLOC1S5-TXNDC5H3BN57 136 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 CLEC2LP0C7M8 214 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 CCL5P13501 91 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 POLR2CP19387 275 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 PCMT1P22061 227 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 AHCYP23526 432 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 CERS1P27544 350 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 PSMB5P28074 263 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 HOXC8P31273 242 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 MAP3K8P41279 467 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 VIPR2P41587 438 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 SLC1A3P43003 542 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 SOX2P48431 317 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ACTA2P62736 377 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ACTG2P63267 376 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 SELENBP1Q13228 472 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 EIF4EBP2Q13542 120 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 PGGHGQ32M88 737 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 SLC22A10Q63ZE4 541 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 PGBD2Q6P3X8 592 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ARHGAP11AQ6P4F7 1023 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 FIGNL1Q6PIW4 674 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF550Q7Z398 422 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 PHC2Q8IXK0 858 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 MFSD4AQ8N468 514 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 OR9A2Q8NGT5 310 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 CCDC107Q8WV48 283 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 DNAJA4Q8WW22 397 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 DPF3Q92784 378 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 GAL3ST4Q96RP7 486 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 NT5DC2Q9H857 520 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 C1GALT1Q9NS00 363 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 SIRT5Q9NXA8 310 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 SLC7A7Q9UM01 511 aa6.3□□□□□ -1.4
CSDE1-205ENST00000438362 PPIEQ9UNP9 301 aaKnown RBP6.3□□□□□ -1.4
CSDE1-205ENST00000438362 GABRPO00591 440 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 POLR1CO15160 346 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-205ENST00000438362 ETHE1O95571 254 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 ADH1BP00325 375 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 AK1P00568 194 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 HIST1H1TP22492 207 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-205ENST00000438362 GDI1P31150 447 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 MMP12P39900 470 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 AP2S1P53680 142 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-205ENST00000438362 RPS15AP62244 130 aaKnown RBP6.29□□□□□ -1.4
CSDE1-205ENST00000438362 RPS21P63220 83 aaKnown RBP6.29□□□□□ -1.4
CSDE1-205ENST00000438362 PSPHP78330 225 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 CRYZQ08257 329 aaKnown RBP6.29□□□□□ -1.4
CSDE1-205ENST00000438362 CAMK1Q14012 370 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 GAS6Q14393 721 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 FGFBP1Q14512 234 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 PRRT3Q5FWE3 981 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 HENMT1Q5T8I9 393 aaKnown RBP6.29□□□□□ -1.4
CSDE1-205ENST00000438362 PIP5KL1Q5T9C9 394 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 OLFML2AQ68BL7 652 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 LRRC56Q8IYG6 542 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-205ENST00000438362 UBQLNLQ8IYU4 475 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 CYB561A3Q8NBI2 242 aa6.29□□□□□ -1.4
CSDE1-205ENST00000438362 FBXO15Q8NCQ5 510 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-205ENST00000438362 OR2L5Q8NG80 312 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms