RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 PMM1Q92871 262 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 HSPBAP1Q96EW2 488 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 COL21A1Q96P44 957 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 IP6K3Q96PC2 410 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 G6PC3Q9BUM1 346 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 UGT2B28Q9BY64 529 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 MTHFD2LQ9H903 347 aaPredicted RBP21.28■■□□□ 1
CPSF4-204ENST00000436336 ZNF160Q9HCG1 818 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 S100A14Q9HCY8 104 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 P4HTMQ9NXG6 502 aa21.28■■□□□ 1
CPSF4-204ENST00000436336 PRKD3O94806 890 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 MFN2O95140 757 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 ZIC2O95409 532 aaPredicted RBP21.27■■□□□ 1
CPSF4-204ENST00000436336 OPN1SWP03999 348 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 ICAM2P13598 275 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 LIFP15018 202 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 SLC7A1P30825 629 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 NR0B1P51843 470 aaKnown RBP21.27■■□□□ 1
CPSF4-204ENST00000436336 SELENOWP63302 87 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 ENPP6Q6UWR7 440 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 ZNF619Q8N2I2 560 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 BCORP1Q8N888 145 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 PYURFQ96I23 114 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 CCM2LQ9NUG4 571 aaPredicted RBP21.27■■□□□ 1
CPSF4-204ENST00000436336 FBXO34Q9NWN3 711 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 MRTO4Q9UKD2 239 aaKnown RBP21.27■■□□□ 1
CPSF4-204ENST00000436336 MKLN1Q9UL63 735 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 V9GYQ6 96 aa21.27■■□□□ 1
CPSF4-204ENST00000436336 SUV39H1O43463 412 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 KRT36O76013 467 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 ATP6V1C1P21283 382 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 DECR1Q16698 335 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 ARMC8Q8IUR7 673 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 DEFB126Q9BYW3 111 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 SEC14L3Q9UDX4 400 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 FBXL4Q9UKA2 621 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 AURKCQ9UQB9 309 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 PEX12O00623 359 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 KIAA0513O60268 411 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 ALPPP05187 535 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 SPINK2P20155 84 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 PSMD4P55036 377 aaKnown RBP21.26■□□□□ 0.99
CPSF4-204ENST00000436336 AP2B1P63010 937 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 CPEB4Q17RY0 729 aaKnown RBP eCLIP21.26■□□□□ 0.99
CPSF4-204ENST00000436336 FAM98BQ52LJ0 330 aaKnown RBP21.26■□□□□ 0.99
CPSF4-204ENST00000436336 FAM86B1Q8N7N1 296 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 LZICQ8WZA0 190 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 SLCO4A1Q96BD0 722 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 SEPHS2Q99611 448 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 DOHHQ9BU89 302 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 MAGIXQ9H6Y5 334 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 DCLRE1BQ9H816 532 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 ANGPTL2Q9UKU9 493 aa21.26■□□□□ 0.99
CPSF4-204ENST00000436336 NINQ8N4C6 2090 aa21.25■□□□□ 0.99
CPSF4-204ENST00000436336 CDC14CA4D256 554 aa21.25■□□□□ 0.99
CPSF4-204ENST00000436336 IGKV1D-16P01601 117 aa21.25■□□□□ 0.99
CPSF4-204ENST00000436336 HOXB6P17509 224 aaKnown RBP21.25■□□□□ 0.99
CPSF4-204ENST00000436336 PLA2G5P39877 138 aa21.25■□□□□ 0.99
CPSF4-204ENST00000436336 RFX3P48380 749 aa21.25■□□□□ 0.99
CPSF4-204ENST00000436336 GPR68Q15743 365 aa21.25■□□□□ 0.99
CPSF4-204ENST00000436336 IRAK1BP1Q5VVH5 260 aa21.25■□□□□ 0.99
CPSF4-204ENST00000436336 SPPL2AQ8TCT8 520 aa21.25■□□□□ 0.99
CPSF4-204ENST00000436336 SLC47A1Q96FL8 570 aa21.25■□□□□ 0.99
CPSF4-204ENST00000436336 TPD52L3Q96J77 140 aa21.25■□□□□ 0.99
CPSF4-204ENST00000436336 HSH2DQ96JZ2 352 aa21.25■□□□□ 0.99
CPSF4-204ENST00000436336 TRIM45Q9H8W5 580 aaPredicted RBP21.25■□□□□ 0.99
CPSF4-204ENST00000436336 MSRB2Q9Y3D2 182 aa21.25■□□□□ 0.99
CPSF4-204ENST00000436336 AP4S1Q9Y587 144 aa21.25■□□□□ 0.99
CPSF4-204ENST00000436336 TMEM200CA6NKL6 621 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 TMEM229AB2RXF0 380 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 IL33O95760 270 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 PABPC4LP0CB38 370 aaKnown RBP21.24■□□□□ 0.99
CPSF4-204ENST00000436336 NRG3P56975 720 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 CHRNB3Q05901 458 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 FLYWCH1Q4VC44 716 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 PEX5LQ8IYB4 626 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 SLC34A3Q8N130 599 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 SMYD1Q8NB12 490 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 PAPD5Q8NDF8 572 aaKnown RBP21.24■□□□□ 0.99
CPSF4-204ENST00000436336 TMBIM1Q969X1 311 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 LMF1Q96S06 567 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 QRSL1Q9H0R6 528 aaKnown RBP21.24■□□□□ 0.99
CPSF4-204ENST00000436336 CACYBPQ9HB71 228 aaKnown RBP21.24■□□□□ 0.99
CPSF4-204ENST00000436336 ARMC1Q9NVT9 282 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 BAG5Q9UL15 447 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 IFT52Q9Y366 437 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 PCDHGA10Q9Y5H3 936 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 H3BNX3 289 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 ATP6V1G2O95670 118 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 CELA2AP08217 269 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 RAP2AP10114 183 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 CD247P20963 164 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 KCNJ5P48544 419 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 CLN3Q13286 438 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 ATP1A4Q13733 1029 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 TBCELQ5QJ74 424 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 ZAR1Q86SH2 424 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 VASH2Q86V25 355 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 TAGAPQ8N103 731 aa21.24■□□□□ 0.99
CPSF4-204ENST00000436336 OR10Q1Q8NGQ4 319 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms