RNA–Protein interactions for RNA: ENST00000435527.6

CLOCK-203, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-203ENST00000435527 TMEM211Q6ICI0 200 aa16.52■□□□□ 0.24
CLOCK-203ENST00000435527 ZCCHC12Q6PEW1 402 aa16.52■□□□□ 0.24
CLOCK-203ENST00000435527 TRIM42Q8IWZ5 723 aa16.52■□□□□ 0.24
CLOCK-203ENST00000435527 SLC16A11Q8NCK7 471 aa16.52■□□□□ 0.24
CLOCK-203ENST00000435527 FAM110BQ8TC76 370 aa16.52■□□□□ 0.24
CLOCK-203ENST00000435527 PIK3R3Q92569 461 aa16.52■□□□□ 0.24
CLOCK-203ENST00000435527 ATP6V1G3Q96LB4 118 aa16.52■□□□□ 0.24
CLOCK-203ENST00000435527 TIMP4Q99727 224 aa16.52■□□□□ 0.24
CLOCK-203ENST00000435527 DUSP26Q9BV47 211 aa16.52■□□□□ 0.24
CLOCK-203ENST00000435527 FLRT3Q9NZU0 649 aa16.52■□□□□ 0.24
CLOCK-203ENST00000435527 PCDHGB3Q9Y5G1 929 aa16.52■□□□□ 0.24
CLOCK-203ENST00000435527 B4DXG7 233 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 KLF11O14901 512 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 HDAC3O15379 428 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 C6orf47O95873 294 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 ACP2P11117 423 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 ACVR2AP27037 513 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 WNT3P56703 355 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 LSM12Q3MHD2 195 aaKnown RBP16.51■□□□□ 0.23
CLOCK-203ENST00000435527 EIPR1Q53HC9 387 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 TTMPQ5BVD1 217 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 SP5Q6BEB4 398 aaPredicted RBP16.51■□□□□ 0.23
CLOCK-203ENST00000435527 VASNQ6EMK4 673 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 OGFOD2Q6N063 350 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 MFSD12Q6NUT3 480 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 ZNF585AQ6P3V2 769 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 HDXQ7Z353 690 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 PLCZ1Q86YW0 608 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 WDR75Q8IWA0 830 aaKnown RBP16.51■□□□□ 0.23
CLOCK-203ENST00000435527 GPR151Q8TDV0 419 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 ZNF75CPQ92670 426 aaPredicted RBP16.51■□□□□ 0.23
CLOCK-203ENST00000435527 MS4A4EQ96PG1 132 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 SH3GL2Q99962 352 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 RTN4RQ9BZR6 473 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 CXorf36Q9H7Y0 433 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 SERHLQ9NQF3 203 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 MRTO4Q9UKD2 239 aaKnown RBP16.51■□□□□ 0.23
CLOCK-203ENST00000435527 MAPRE3Q9UPY8 281 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 FAM215AQ9Y5M1 114 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 KLF2Q9Y5W3 355 aaPredicted RBP16.51■□□□□ 0.23
CLOCK-203ENST00000435527 WIF1Q9Y5W5 379 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 FREM3P0C091 2139 aa16.51■□□□□ 0.23
CLOCK-203ENST00000435527 SCN2BO60939 215 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 HMGN2P05204 90 aaKnown RBP16.5■□□□□ 0.23
CLOCK-203ENST00000435527 GRNP28799 593 aaKnown RBP16.5■□□□□ 0.23
CLOCK-203ENST00000435527 CCT3P49368 545 aaKnown RBP16.5■□□□□ 0.23
CLOCK-203ENST00000435527 PHC1P78364 1004 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 PRR5P85299 388 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 CRYZQ08257 329 aaKnown RBP16.5■□□□□ 0.23
CLOCK-203ENST00000435527 PMPCAQ10713 525 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 DUSP5Q16690 384 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 PGS1Q32NB8 556 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 VPS26BQ4G0F5 336 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 NHSL2Q5HYW2 709 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 WIPI1Q5MNZ9 446 aaPredicted RBP16.5■□□□□ 0.23
CLOCK-203ENST00000435527 OR5M10Q6IEU7 315 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 YRDCQ86U90 279 aaKnown RBP16.5■□□□□ 0.23
CLOCK-203ENST00000435527 FAM83FQ8NEG4 500 aaPredicted RBP16.5■□□□□ 0.23
CLOCK-203ENST00000435527 SLC9A6Q92581 669 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 YIPF4Q9BSR8 244 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 DPY30Q9C005 99 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 WDR55Q9H6Y2 383 aaPredicted RBP16.5■□□□□ 0.23
CLOCK-203ENST00000435527 ZCCHC3Q9NUD5 404 aaKnown RBP16.5■□□□□ 0.23
CLOCK-203ENST00000435527 FBXL2Q9UKC9 423 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 SLC6A5Q9Y345 797 aa16.5■□□□□ 0.23
CLOCK-203ENST00000435527 C17orf51A8MQB3 221 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 PRSS44E7EML9 344 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 SLCO1B7G3V0H7 640 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 WDR1O75083 606 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 KCNH1O95259 989 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 HOXD4P09016 255 aaPredicted RBP16.49■□□□□ 0.23
CLOCK-203ENST00000435527 ALDOCP09972 364 aaKnown RBP16.49■□□□□ 0.23
CLOCK-203ENST00000435527 KITP10721 976 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 BMP7P18075 431 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 EVI2BP34910 448 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 DCTP40126 519 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 PRIM2P49643 509 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 PSMD4P55036 377 aaKnown RBP16.49■□□□□ 0.23
CLOCK-203ENST00000435527 NUP107P57740 925 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 HBA1P69905 142 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 TOMM20Q15388 145 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 ZNF630Q2M218 657 aaPredicted RBP16.49■□□□□ 0.23
CLOCK-203ENST00000435527 ZNF787Q6DD87 383 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 OR4F3Q6IEY1 312 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 APOOLQ6UXV4 268 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 OR8J2Q8NGG1 315 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 RMND5BQ96G75 393 aaPredicted RBP16.49■□□□□ 0.23
CLOCK-203ENST00000435527 TTYH2Q9BSA4 534 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 OR2B2Q9GZK3 357 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 VIPAS39Q9H9C1 493 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 GPATCH2Q9NW75 528 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 FAM120CQ9NX05 1096 aaKnown RBP16.49■□□□□ 0.23
CLOCK-203ENST00000435527 GIN1Q9NXP7 522 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 ALKBH4Q9NXW9 302 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 MARCOQ9UEW3 520 aaPredicted RBP16.49■□□□□ 0.23
CLOCK-203ENST00000435527 MRPS18CQ9Y3D5 142 aaKnown RBP16.49■□□□□ 0.23
CLOCK-203ENST00000435527 SNX8Q9Y5X2 465 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 NBPF19A0A087WUL8 3843 aa16.49■□□□□ 0.23
CLOCK-203ENST00000435527 NUP214P35658 2090 aaPredicted RBP16.49■□□□□ 0.23
CLOCK-203ENST00000435527 C15orf38-AP3S2A0A0A6YYH1 394 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms