RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 PGGHGQ32M88 737 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 PUS10Q3MIT2 529 aaKnown RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 PRRT3Q5FWE3 981 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 C6orf132Q5T0Z8 1188 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 AADACL4Q5VUY2 407 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 FBXO42Q6P3S6 717 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 ZCCHC12Q6PEW1 402 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 SYCE2Q6PIF2 218 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 XKRXQ6PP77 449 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 PAQR6Q6TCH4 344 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 PARM1Q6UWI2 310 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 FRRS1Q6ZNA5 592 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 PRR23CQ6ZRP0 262 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 QSOX2Q6ZRP7 698 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 NCCRP1Q6ZVX7 275 aaPredicted RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 GDF7Q7Z4P5 450 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 HMGN2P46Q86SG4 172 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 RNF113BQ8IZP6 322 aaKnown RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 KLHL36Q8N4N3 616 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 ZNF655Q8N720 491 aaPredicted RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 POGLUT1Q8NBL1 392 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 KCT2Q8NC54 265 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 PSD4Q8NDX1 1056 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 OR7G2Q8NG99 324 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 OR8D4Q8NGM9 314 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 JPH3Q8WXH2 748 aaPredicted RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 ASB15Q8WXK1 588 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 RSC1A1Q92681 617 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 SDHCQ99643 169 aaPredicted RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 JAM3Q9BX67 310 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 QRSL1Q9H0R6 528 aaKnown RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 PIGUQ9H490 435 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 CERS4Q9HA82 394 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 INIPQ9NRY2 104 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 IL20Q9NYY1 176 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 KCMF1Q9P0J7 381 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 FBXL21Q9UKT6 434 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 GPR55Q9Y2T6 319 aaPredicted RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 A0A087WV62 115 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 TRDV1A0A1B0GX56 115 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 A0A1W2PS29 197 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 FAM221BA6H8Z2 402 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 WWP2O00308 870 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 SURF4O15260 269 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 SOX30O94993 753 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 KLF8O95600 359 aaPredicted RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 CPMP14384 443 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 GNSP15586 552 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 NDUFV2P19404 249 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 HTR1FP30939 366 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 FGF9P31371 208 aaPredicted RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 SLC1A3P43003 542 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 SOX9P48436 509 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 PPP2CBP62714 309 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 PPP2CAP67775 309 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 SCN1BQ07699 218 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 SELENBP1Q13228 472 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 MANEAQ5SRI9 462 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 ARMC4Q5T2S8 1044 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 NXNL2Q5VZ03 156 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 TYW3Q6IPR3 259 aaKnown RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 CD200R1LQ6Q8B3 271 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 FIGLAQ6QHK4 219 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 GID4Q8IVV7 300 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 NKAIN4Q8IVV8 208 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 ZNF619Q8N2I2 560 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 GDPD1Q8N9F7 314 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 OR2T33Q8NG76 320 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 OR52N1Q8NH53 320 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 GPR151Q8TDV0 419 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 CDS1Q92903 461 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 C1GALT1C1Q96EU7 318 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 SIPA1Q96FS4 1042 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 TRMT61AQ96FX7 289 aaKnown RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 OR2A14Q96R47 310 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 OR2A5Q96R48 311 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 ARHGAP9Q9BRR9 750 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 CNIH4Q9P003 139 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 ZNF624Q9P2J8 865 aaPredicted RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 DAPP1Q9UN19 280 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 C19orf53Q9UNZ5 99 aaPredicted RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 SATB2Q9UPW6 733 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 CLCA2Q9UQC9 943 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 CAB39Q9Y376 341 aaPredicted RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 SF3B6Q9Y3B4 125 aaKnown RBP9.74□□□□□ -0.85
CD44-210ENST00000434472 ENTPD2Q9Y5L3 495 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 SLC22A7Q9Y694 548 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 V9GYH0 126 aa9.74□□□□□ -0.85
CD44-210ENST00000434472 BRCA2P51587 3418 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 TRAPPC13A5PLN9 417 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 UNC119BA6NIH7 251 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 FRS3O43559 492 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 AKAP8O43823 692 aaKnown RBP9.73□□□□□ -0.85
CD44-210ENST00000434472 FCMRO60667 390 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 FMO6PO60774 539 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 LIMS3P0CW19 117 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 LIMS4P0CW20 117 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 UGT2B7P16662 529 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 GALP22466 123 aa9.73□□□□□ -0.85
CD44-210ENST00000434472 HNRNPA2B1P22626 353 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms