RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 INSL4Q14641 139 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 DUSP6Q16828 381 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 TMEM240Q5SV17 173 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 PRAMEF8Q5VWM4 474 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 PRAMEF7Q5VXH5 474 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 PSRC1Q6PGN9 363 aaPredicted RBP11.05□□□□□ -0.64
CD44-209ENST00000433892 VITQ6UXI7 678 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 NRMQ8IXM6 262 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 GDPD1Q8N9F7 314 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 KCT2Q8NC54 265 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 SLC16A11Q8NCK7 471 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 SIMC1Q8NDZ2 872 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 ATP6V1C2Q8NEY4 427 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 BBS1Q8NFJ9 593 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 TMEM255BQ8WV15 326 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 TP53INP1Q96A56 240 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 COL26A1Q96A83 441 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 SLC35A4Q96G79 324 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 TIMM29Q9BSF4 260 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 MED18Q9BUE0 208 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 RAB11FIP5Q9BXF6 653 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 TBC1D17Q9HA65 648 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 DPP7Q9UHL4 492 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 CLCA2Q9UQC9 943 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 LIPT1Q9Y234 373 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 ZNF780BQ9Y6R6 833 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 CCDC182A6NF36 153 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 ISM1B1AKI9 464 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 SURF4O15260 269 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 PIP5K1CO60331 668 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 NCR1O76036 304 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 CELP19835 753 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 MAT2AP31153 395 aaKnown RBP11.05□□□□□ -0.64
CD44-209ENST00000433892 SGCGQ13326 291 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 TBRG1Q3YBR2 411 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 ZFP69Q49AA0 526 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 C2orf27AQ580R0 203 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 PLEKHM3Q6ZWE6 761 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 ZNF513Q8N8E2 541 aaPredicted RBP11.05□□□□□ -0.64
CD44-209ENST00000433892 ZNF485Q8NCK3 441 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 GANCQ8TET4 914 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 AP3S1Q92572 193 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 OTULINQ96BN8 352 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 GIMAP5Q96F15 307 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 RSPH9Q9H1X1 276 aaPredicted RBP11.05□□□□□ -0.64
CD44-209ENST00000433892 MALT1Q9UDY8 824 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 SNX7Q9UNH6 387 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 CSNK1G3Q9Y6M4 447 aa11.05□□□□□ -0.64
CD44-209ENST00000433892 A6NL46 340 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 APEX1P27695 318 aaKnown RBP11.04□□□□□ -0.64
CD44-209ENST00000433892 FGF9P31371 208 aaPredicted RBP11.04□□□□□ -0.64
CD44-209ENST00000433892 IFNA8P32881 189 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 CLDN2P57739 230 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 ABATP80404 500 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 RUNX3Q13761 415 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 RPE65Q16518 533 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 ZNF791Q3KP31 576 aaPredicted RBP11.04□□□□□ -0.64
CD44-209ENST00000433892 ZNF628Q5EBL2 1059 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 TJAP1Q5JTD0 557 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 SLC35F1Q5T1Q4 408 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 AADACL4Q5VUY2 407 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 CD200R1LQ6Q8B3 271 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 FAM111BQ6SJ93 734 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 B3GLCTQ6Y288 498 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 POGLUT1Q8NBL1 392 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 ADAMTS15Q8TE58 950 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 ACOT11Q8WXI4 607 aaPredicted RBP11.04□□□□□ -0.64
CD44-209ENST00000433892 OSTF1Q92882 214 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 RFKQ969G6 155 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 ARMC5Q96C12 935 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 SLC41A3Q96GZ6 507 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 MCHR1Q99705 422 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 ACTRT3Q9BYD9 372 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 PRRG3Q9BZD7 231 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 OR2B2Q9GZK3 357 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 ISYNA1Q9NPH2 558 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 KLHL28Q9NXS3 571 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 FAM183AA6NL82 134 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 B4DXG7 233 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 PLA2G10O15496 165 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 HPGDSO60760 199 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 FCARP24071 287 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 FPR3P25089 353 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 CMPK1P30085 196 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 PRKAR1BP31321 381 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 ATP6V1E1P36543 226 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 DDOSTP39656 456 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 MRPS15P82914 257 aaKnown RBP11.04□□□□□ -0.64
CD44-209ENST00000433892 DBPQ10586 325 aaPredicted RBP11.04□□□□□ -0.64
CD44-209ENST00000433892 ZNF155Q12901 538 aaPredicted RBP11.04□□□□□ -0.64
CD44-209ENST00000433892 AGERQ15109 404 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.04□□□□□ -0.64
CD44-209ENST00000433892 C6orf183Q5T699 404 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 GDF7Q7Z4P5 450 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 GJD3Q8N144 294 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 MFSD9Q8NBP5 474 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 SRFBP1Q8NEF9 429 aaKnown RBP11.04□□□□□ -0.64
CD44-209ENST00000433892 OR7G2Q8NG99 324 aa11.04□□□□□ -0.64
CD44-209ENST00000433892 OR4E2Q8NGC2 313 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms