RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 VCPP55072 806 aaKnown RBP2.36□□□□□ -2.03
CLK1-204ENST00000432425 ERVPABLB-1P60509 514 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 MYL6P60660 151 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 NUCB2P80303 420 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 PRKCEQ02156 737 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 SLC34A1Q06495 639 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 LRIT3Q3SXY7 679 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 SMUG1Q53HV7 270 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 HSP90AA4PQ58FG1 418 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 DCAF12Q5T6F0 453 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 NEK5Q6P3R8 708 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 FAM173BQ6P4H8 233 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 MSANTD1Q6ZTZ1 278 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 LUZP1Q86V48 1076 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 PSTKQ8IV42 348 aaKnown RBP2.36□□□□□ -2.03
CLK1-204ENST00000432425 CD302Q8IX05 232 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 CCDC110Q8TBZ0 833 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 PARK7Q99497 189 aaKnown RBP2.36□□□□□ -2.03
CLK1-204ENST00000432425 GAL3ST1Q99999 423 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 C19orf43Q9BQ61 176 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 TBCDQ9BTW9 1192 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 FANCEQ9HB96 536 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 SMPD3Q9NY59 655 aaPredicted RBP2.36□□□□□ -2.03
CLK1-204ENST00000432425 TAS2R16Q9NYV7 291 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 MAD2L2Q9UI95 211 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 GAKO14976 1311 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 MYO3BQ8WXR4 1341 aa2.36□□□□□ -2.03
CLK1-204ENST00000432425 SERTM2A0A1B0GWG4 89 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 OR6C74A6NCV1 312 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 OOEPA6NGQ2 149 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 ZW10O43264 779 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 ATP9AO75110 1047 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 SLC16A8O95907 504 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 KRT6AP02538 564 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 KRT6BP04259 564 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 RPSAP08865 295 aaKnown RBP2.35□□□□□ -2.03
CLK1-204ENST00000432425 GALP22466 123 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 PRKAR2BP31323 418 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 KRT6CP48668 564 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 ARF5P84085 180 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 ARHGAP1Q07960 439 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 MEF2DQ14814 521 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 HERC4Q5GLZ8 1057 aaPredicted RBP2.35□□□□□ -2.03
CLK1-204ENST00000432425 LRRC38Q5VT99 294 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 PRAMEF8Q5VWM4 474 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 WDR25Q64LD2 544 aaPredicted RBP2.35□□□□□ -2.03
CLK1-204ENST00000432425 Q6ZRG5 221 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 AQP12AQ8IXF9 295 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 THEM5Q8N1Q8 247 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 LPCAT1Q8NF37 534 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 OR7G3Q8NG95 312 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 PEX13Q92968 403 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 DTD2Q96FN9 168 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 CDKN2AIPNLQ96HQ2 116 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 ARL5BQ96KC2 179 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 MTMR9Q96QG7 549 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 NAP1L3Q99457 506 aaPredicted RBP2.35□□□□□ -2.03
CLK1-204ENST00000432425 SSX3Q99909 188 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 ZNF559Q9BR84 538 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 TTYH2Q9BSA4 534 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 VCX3BQ9H321 246 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 XKR8Q9H6D3 395 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 C8orf33Q9H7E9 229 aaPredicted RBP2.35□□□□□ -2.03
CLK1-204ENST00000432425 IL1RL2Q9HB29 575 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 PARVGQ9HBI0 331 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 TUFT1Q9NNX1 390 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 PRMT8Q9NR22 394 aaPredicted RBP2.35□□□□□ -2.03
CLK1-204ENST00000432425 POLE3Q9NRF9 147 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 GDAP2Q9NXN4 497 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 MIS18AQ9NYP9 233 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 SPG21Q9NZD8 308 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 ERVK-19Q9WJR5 959 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 KCNK6Q9Y257 313 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 NUDCQ9Y266 331 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 PLEKHA6Q9Y2H5 1048 aa2.35□□□□□ -2.03
CLK1-204ENST00000432425 SDR42E2A6NKP2 422 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 CCT8L1PA6NM43 557 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 RSPH10B2B2RC85 870 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 E9PBE3 544 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 SLC33A1O00400 549 aaPredicted RBP2.34□□□□□ -2.03
CLK1-204ENST00000432425 GPAA1O43292 621 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 BUB1O43683 1085 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 GMFGO60234 142 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 CACNG3O60359 315 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 MTX2O75431 263 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 RSPH10BP0C881 870 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 C8orf89P0DMQ9 161 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 GLRA2P23416 452 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 CHMLP26374 656 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 PTPN4P29074 926 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 FRKP42685 505 aaPredicted RBP2.34□□□□□ -2.03
CLK1-204ENST00000432425 PRRX1P54821 245 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 EIF3EP60228 445 aaKnown RBP2.34□□□□□ -2.03
CLK1-204ENST00000432425 STX1BP61266 288 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 ST8SIA6P61647 398 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 CXCL6P80162 114 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 PAX2Q02962 417 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 GABPAQ06546 454 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 IL24Q13007 206 aa2.34□□□□□ -2.03
CLK1-204ENST00000432425 LCP2Q13094 533 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms