RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SPAG6O75602 509 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 IGSF6O95976 241 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 OPN1LWP04000 364 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 CA3P07451 260 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 FCGR3AP08637 254 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 THRBP10828 461 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 DPEP1P16444 411 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 DRD5P21918 477 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 SOX6P35712 828 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 SLC1A4P43007 532 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 POU3F4P49335 361 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 ARFIP1P53367 373 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 MTTPP55157 894 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZNF33BQ06732 778 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 OVGP1Q12889 678 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 EXOSC2Q13868 293 aaKnown RBP2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 SLC15A2Q16348 729 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 VWA2Q5GFL6 755 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZNF311Q5JNZ3 666 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 TCHHL1Q5QJ38 904 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZNF497Q6ZNH5 498 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 ARMCX2Q7L311 632 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 ERASQ7Z444 233 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 RNF130Q86XS8 419 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 SAMD12Q8N8I0 201 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 MAPK1IP1LQ8NDC0 245 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 OR4F17Q8NGA8 305 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 NPRL2Q8WTW4 380 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 LHX4Q969G2 390 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 C11orf24Q96F05 449 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 ANKRD27Q96NW4 1050 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 OR4F4Q96R69 305 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 RBM4BQ9BQ04 359 aaKnown RBP2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 FAM173AQ9BQD7 235 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 APOOQ9BUR5 198 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZNF416Q9BWM5 594 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 RAB33BQ9H082 229 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 TSPY26PQ9H489 355 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 KAT8Q9H7Z6 458 aaKnown RBP2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 WDR76Q9H967 626 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 GNB4Q9HAV0 340 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 IL1RL2Q9HB29 575 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 LPAR2Q9HBW0 351 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 FAM114A2Q9NRY5 505 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 TMOD2Q9NZR1 351 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 LAMP5Q9UJQ1 280 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZNF346Q9UL40 294 aaKnown RBP2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 FBXO7Q9Y3I1 522 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZC3H13Q5T200 1668 aaKnown RBP2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 ADGBQ8N7X0 1667 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 DIP2AQ14689 1571 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 C1orf167Q5SNV9 1468 aa2.52□□□□□ -2.01
HMGB1P27-201ENST00000431429 ADGRL3Q9HAR2 1447 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 RIMS2Q9UQ26 1411 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 KDRP35968 1356 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 CCDC7Q96M83 1385 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 MAP3K5Q99683 1374 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 SF3B1O75533 1304 aaKnown RBP eCLIP2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 PREX2Q70Z35 1606 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 IGHV3OR16-12A0A075B7B8 117 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 ASB14A6NK59 587 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 WASHC1A8K0Z3 465 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 WASH3PC4AMC7 463 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 IDH1O75874 414 aaKnown RBP2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 PDE5AO76074 875 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 MFN2O95140 757 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 RENP00797 406 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 IGHDP01880 384 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 MELTFP08582 738 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 ANXA4P09525 319 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 IQCF3P0C7M6 154 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 TRIM49P0CI25 452 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 TRIM49CP0CI26 452 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 CALCBP10092 127 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 OTX2P32243 289 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 CYLC1P35663 651 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 HTR5AP47898 357 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 RIDAP52758 137 aaKnown RBP2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 PAX8Q06710 450 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 RAPSNQ13702 412 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 TFDP1Q14186 410 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 ANKDD1AQ495B1 522 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 C14orf177Q52M58 125 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 CYBRD1Q53TN4 286 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 SEL1L2Q5TEA6 688 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 GFI1BQ5VTD9 330 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 NCR3LG1Q68D85 454 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 ASPHD2Q6ICH7 369 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 SULT1C3Q6IMI6 304 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 ZNF343Q6P1L6 599 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 CES3Q6UWW8 571 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 CCBE1Q6UXH8 406 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 WASH2PQ6VEQ5 465 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 STAC2Q6ZMT1 411 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 PPP1R42Q7Z4L9 355 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 LUZP1Q86V48 1076 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 CENPLQ8N0S6 344 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 ABHD12Q8N2K0 398 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 C4orf32Q8N8J7 132 aa2.51□□□□□ -2.01
HMGB1P27-201ENST00000431429 SUMF1Q8NBK3 374 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms