RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MEIOBQ8N635 442 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 FADS6Q8N9I5 356 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 WFDC11Q8NEX6 87 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 CCDC126Q96EE4 140 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 BBS4Q96RK4 519 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 EBPLQ9BY08 206 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 MIEF1Q9NQG6 463 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 MRTO4Q9UKD2 239 aaKnown RBP13.47□□□□□ -0.25
MSH5-208ENST00000429846 GRID1Q9ULK0 1009 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 TESMINQ9Y4I5 508 aa13.47□□□□□ -0.25
MSH5-208ENST00000429846 SLC22A20A6NK97 555 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 MYO1GB0I1T2 1018 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 SCO2O43819 266 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 TGM6O95932 706 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 IFI6P09912 130 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 GCAP28676 217 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 NTSP30990 170 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 NCBP2P52298 156 aaKnown RBP eCLIP13.46□□□□□ -0.25
MSH5-208ENST00000429846 PSMD4P55036 377 aaKnown RBP13.46□□□□□ -0.25
MSH5-208ENST00000429846 B3GALT5-AS1P59052 145 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 OCRLQ01968 901 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 FGFBP1Q14512 234 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 POU4F3Q15319 338 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 ZNHIT3Q15649 155 aaPredicted RBP13.46□□□□□ -0.25
MSH5-208ENST00000429846 DECR1Q16698 335 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 SHEQ5VZ18 495 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 PLXDC2Q6UX71 529 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 TRMT10CQ7L0Y3 403 aaKnown RBP13.46□□□□□ -0.25
MSH5-208ENST00000429846 OR4N2Q8NGD1 307 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 FAM76AQ8TAV0 307 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 C18orf12Q96KH6 178 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 PTGES2Q9H7Z7 377 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 Q9N2J8 555 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 MYNNQ9NPC7 610 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 FAM120CQ9NX05 1096 aaKnown RBP13.46□□□□□ -0.25
MSH5-208ENST00000429846 ZNF226Q9NYT6 803 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 TAS2R7Q9NYW3 318 aa13.46□□□□□ -0.25
MSH5-208ENST00000429846 C19orf53Q9UNZ5 99 aaPredicted RBP13.46□□□□□ -0.25
MSH5-208ENST00000429846 WBP11Q9Y2W2 641 aaKnown RBP13.46□□□□□ -0.25
MSH5-208ENST00000429846 ABCA2Q9BZC7 2435 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 A0A1W2PPR1 153 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 TTC36A6NLP5 189 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 B4DXG7 233 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 NME6O75414 186 aaPredicted RBP13.45□□□□□ -0.26
MSH5-208ENST00000429846 TNFRSF21O75509 655 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 SMNDC1O75940 238 aaKnown RBP eCLIP13.45□□□□□ -0.262e-12■■□□□ 13.9
MSH5-208ENST00000429846 PSMG1O95456 288 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 JUNP05412 331 aaKnown RBP13.45□□□□□ -0.26
MSH5-208ENST00000429846 MC3RP41968 323 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 CLK3P49761 638 aaKnown RBP13.45□□□□□ -0.26
MSH5-208ENST00000429846 IMPG1Q17R60 797 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 SPDYAQ5MJ70 313 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 RAET1LQ5VY80 246 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 IKBIPQ70UQ0 350 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 UBQLNLQ8IYU4 475 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 OR2L13Q8N349 312 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 CNEP1R1Q8N9A8 125 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 OR2M3Q8NG83 312 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.45□□□□□ -0.26
MSH5-208ENST00000429846 STARD4Q96DR4 205 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 PIGQQ9BRB3 760 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 DSN1Q9H410 356 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 GSX1Q9H4S2 264 aaPredicted RBP13.45□□□□□ -0.26
MSH5-208ENST00000429846 GSTO2Q9H4Y5 243 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 HHATLQ9HCP6 504 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 MID1IP1Q9NPA3 183 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 DDX18Q9NVP1 670 aaKnown RBP13.45□□□□□ -0.26
MSH5-208ENST00000429846 ELOVL5Q9NYP7 299 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 PSMC3IPQ9P2W1 217 aaPredicted RBP13.45□□□□□ -0.26
MSH5-208ENST00000429846 ZNF175Q9Y473 711 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 TIMM22Q9Y584 194 aa13.45□□□□□ -0.26
MSH5-208ENST00000429846 ARHGEF9O43307 516 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 RIPK2O43353 540 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 FADS1O60427 444 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 RSL1D1O76021 490 aaKnown RBP13.44□□□□□ -0.26
MSH5-208ENST00000429846 FCGR2AP12318 317 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 HK1P19367 917 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 CD79BP40259 229 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 NKX6-1P78426 367 aaPredicted RBP13.44□□□□□ -0.26
MSH5-208ENST00000429846 BTKQ06187 659 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 C2orf80Q0P641 193 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 GLYR1Q49A26 553 aaPredicted RBP13.44□□□□□ -0.26
MSH5-208ENST00000429846 SH2D4BQ5SQS7 431 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 FAM71E1Q6IPT2 247 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 TMEM107Q6UX40 140 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 LRRC75A-AS1Q8N1F1 130 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 CDC26Q8NHZ8 85 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 METTL2AQ96IZ6 378 aaKnown RBP13.44□□□□□ -0.26
MSH5-208ENST00000429846 FAM111AQ96PZ2 611 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 KCNA7Q96RP8 456 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 PIP5K1AQ99755 562 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 SLC39A3Q9BRY0 314 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 LMF2Q9BU23 707 aaKnown RBP13.44□□□□□ -0.26
MSH5-208ENST00000429846 DCDC2Q9UHG0 476 aa13.44□□□□□ -0.26
MSH5-208ENST00000429846 FAM171A2A8MVW0 826 aa13.43□□□□□ -0.26
MSH5-208ENST00000429846 UPK1AO00322 258 aa13.43□□□□□ -0.26
MSH5-208ENST00000429846 CTIFO43310 598 aaKnown RBP13.43□□□□□ -0.26
MSH5-208ENST00000429846 EMC8O43402 210 aa13.43□□□□□ -0.26
MSH5-208ENST00000429846 IL33O95760 270 aa13.43□□□□□ -0.26
MSH5-208ENST00000429846 CD8BP10966 210 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms