RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 ZBP1Q9H171 429 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 MED28Q9H204 178 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 TEX10Q9NXF1 929 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-204ENST00000424143 KLHL28Q9NXS3 571 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 H2AFY2Q9P0M6 372 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-204ENST00000424143 TNFRSF10DQ9UBN6 386 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 EIF3KQ9UBQ5 218 aaKnown RBP14.26□□□□□ -0.13
C9orf3-204ENST00000424143 EXTL2Q9UBQ6 330 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 SLC13A4Q9UKG4 626 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 HSPB11Q9Y547 144 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 LRRK1Q38SD2 2015 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 A0A1W2PPV9 198 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 C12orf71A8MTZ7 269 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 LEUTXA8MZ59 168 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 B8ZZF3 427 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 PLOD3O60568 738 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 TMEM127O75204 238 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 ITGA10O75578 1167 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 AGR2O95994 175 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 TPOP07202 933 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 C8AP07357 584 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 CISD3P0C7P0 127 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 ACSL1P33121 698 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 BUD31P41223 144 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-204ENST00000424143 PITPNBP48739 271 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 AGFG1P52594 562 aaKnown RBP14.26□□□□□ -0.13
C9orf3-204ENST00000424143 CAV3P56539 151 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 PER3P56645 1201 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 PRR5P85299 388 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 NFE2L1Q14494 772 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 ARHGEF6Q15052 776 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 LY6G5CQ5SRR4 150 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 NDUFAF5Q5TEU4 345 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 ZNF57Q68EA5 555 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-204ENST00000424143 RAET1GQ6H3X3 334 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 RFPL4BQ6ZWI9 263 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 AMZ2Q86W34 360 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 ACBD7Q8N6N7 88 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 TP53I13Q8NBR0 393 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-204ENST00000424143 OR2T33Q8NG76 320 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 CMTM3Q96MX0 182 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 IL17FQ96PD4 163 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 BBS4Q96RK4 519 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 SECISBP2Q96T21 854 aaKnown RBP14.26□□□□□ -0.13
C9orf3-204ENST00000424143 THAP7Q9BT49 309 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-204ENST00000424143 SARGQ9BW04 601 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 HDHD5Q9BXW7 423 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 SLC38A1Q9H2H9 487 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 KCNK12Q9HB15 430 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 TDP1Q9NUW8 608 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 NTMQ9P121 344 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 TAC3Q9UHF0 121 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 NPFFR2Q9Y5X5 522 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 DENND4AQ7Z401 1863 aa14.26□□□□□ -0.13
C9orf3-204ENST00000424143 CKAP5Q14008 2032 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 LRIT2A6NDA9 550 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 TUBAL3A6NHL2 446 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 NRG2O14511 850 aaPredicted RBP14.25□□□□□ -0.13
C9orf3-204ENST00000424143 AKR7A2O43488 359 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 ICMTO60725 284 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 SLC22A5O76082 557 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 STOMP27105 288 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 THBS2P35442 1172 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 SOX18P35713 384 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 TRIM23P36406 574 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 NCBP2P52298 156 aaKnown RBP eCLIP14.25□□□□□ -0.136e-7■■■■■ 27.1
C9orf3-204ENST00000424143 EPHA4P54764 986 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 CTBP2P56545 445 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 CSNK1G2P78368 415 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 METRNLQ641Q3 311 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 LYPD8Q6UX82 237 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 WASH2PQ6VEQ5 465 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 ERN2Q76MJ5 926 aaKnown RBP14.25□□□□□ -0.13
C9orf3-204ENST00000424143 GPALPP1Q8IXQ4 340 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 RNF113BQ8IZP6 322 aaKnown RBP14.25□□□□□ -0.13
C9orf3-204ENST00000424143 RAB42Q8N4Z0 105 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 OR4F15Q8NGB8 312 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 OR5D16Q8NGK9 328 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 OR5AR1Q8NGP9 310 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 CYB5D2Q8WUJ1 264 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 AUTS2Q8WXX7 1259 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 TMED9Q9BVK6 235 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 ACTR6Q9GZN1 396 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 DPAGT1Q9H3H5 408 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 OSGEPL1Q9H4B0 414 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 ZCCHC4Q9H5U6 513 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 TBC1D17Q9HA65 648 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 GALNT9Q9HCQ5 603 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 SEMA4GQ9NTN9 838 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 KCNN3Q9UGI6 736 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 NUP50Q9UKX7 468 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 CCL26Q9Y258 94 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 SLC27A6Q9Y2P4 619 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 CACNG2Q9Y698 323 aa14.25□□□□□ -0.13
C9orf3-204ENST00000424143 A0A0A6YYJ9 748 aa14.24□□□□□ -0.13
C9orf3-204ENST00000424143 LOC102723532A0A0G2JNH3 316 aa14.24□□□□□ -0.13
C9orf3-204ENST00000424143 A0A1W2PQ72 361 aa14.24□□□□□ -0.13
C9orf3-204ENST00000424143 OR5K3A6NET4 321 aa14.24□□□□□ -0.13
C9orf3-204ENST00000424143 GPR89AB7ZAQ6 455 aa14.24□□□□□ -0.13
C9orf3-204ENST00000424143 PLPP2O43688 288 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms