RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 ZNF765Q7L2R6 523 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 CPOQ8IVL8 374 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 PFN4Q8NHR9 129 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 TM9SF4Q92544 642 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 ABHD8Q96I13 439 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 ZNF582Q96NG8 517 aaPredicted RBP12.5□□□□□ -0.41
MCF2L-213ENST00000421756 PTCHD1Q96NR3 888 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 SECISBP2Q96T21 854 aaKnown RBP12.5□□□□□ -0.41
MCF2L-213ENST00000421756 LRRN3Q9H3W5 708 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 A4GALTQ9NPC4 353 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 KCMF1Q9P0J7 381 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 MRPS7Q9Y2R9 242 aaKnown RBP12.5□□□□□ -0.41
MCF2L-213ENST00000421756 TRAV27A0A087WT01 109 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 CCNKO75909 580 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 LALBAP00709 142 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 NOS3P29474 1203 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 C21orf58P58505 322 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 RPA4Q13156 261 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 DUSP5Q16690 384 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 NDUFAF6Q330K2 333 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 OR2M4Q96R27 311 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 GFM1Q96RP9 751 aaKnown RBP12.5□□□□□ -0.41
MCF2L-213ENST00000421756 TEX101Q9BY14 249 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 PCBD2Q9H0N5 130 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 CCDC86Q9H6F5 360 aaKnown RBP12.5□□□□□ -0.41
MCF2L-213ENST00000421756 SMURF1Q9HCE7 757 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 WASH6PQ9NQA3 447 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 KLHL28Q9NXS3 571 aa12.5□□□□□ -0.41
MCF2L-213ENST00000421756 FAM171A2A8MVW0 826 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 K7EQS6 105 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 CLEC3AO75596 197 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 SLC35G6P0C7Q6 338 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 MAOBP27338 520 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 CSNK2BP67870 215 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 ILKQ13418 452 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 GPR18Q14330 331 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 NCF4Q15080 339 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 MAPK14Q16539 360 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 SLC27A4Q6P1M0 643 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 SYCE2Q6PIF2 218 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 SYT9Q86SS6 491 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 ANKK1Q8NFD2 765 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 OR10H4Q8NGA5 316 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 RAB7BQ96AH8 199 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 SLC38A1Q9H2H9 487 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 TRIM45Q9H8W5 580 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-213ENST00000421756 FBXO8Q9NRD0 319 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 HRASLS2Q9NWW9 162 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 FBXL4Q9UKA2 621 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 CDC42EP2O14613 210 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 SEMA3DO95025 777 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 ZIC2O95409 532 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-213ENST00000421756 PEPDP12955 493 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 MAT1AQ00266 395 aaKnown RBP12.49□□□□□ -0.41
MCF2L-213ENST00000421756 RUNX2Q13950 521 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 CCDC80Q76M96 950 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 ZNF367Q7RTV3 350 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 VN1R4Q7Z5H5 301 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 AKAP14Q86UN6 197 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 ATCAYQ86WG3 371 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 PHC2Q8IXK0 858 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 IL17RCQ8NAC3 791 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 RIPOR3Q96MK2 946 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 SIGLEC11Q96RL6 698 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 RSPH9Q9H1X1 276 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-213ENST00000421756 PCDHGA4Q9Y5G9 962 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 SOBPA7XYQ1 873 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 B4DGG1 531 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 ASNA1O43681 348 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 PCSK2P16519 638 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 MTNR1AP48039 350 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 LIMS1P48059 325 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 CCR4P51679 360 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 TUBA1BP68363 451 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 MFSD4BQ5TF39 518 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 TUBA1AQ71U36 451 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 TAF8Q7Z7C8 310 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 TMEM52Q8NDY8 209 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 RPLP0P6Q8NHW5 317 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 TPSD1Q9BZJ3 242 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 WBP1LQ9NX94 342 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 HCN3Q9P1Z3 774 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 PCDHGA3Q9Y5H0 932 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 GPC6Q9Y625 555 aaPredicted RBP12.49□□□□□ -0.41
MCF2L-213ENST00000421756 SLCO1B1Q9Y6L6 691 aa12.49□□□□□ -0.41
MCF2L-213ENST00000421756 CARNS1A5YM72 827 aa12.48□□□□□ -0.41
MCF2L-213ENST00000421756 A8MUA0 341 aa12.48□□□□□ -0.41
MCF2L-213ENST00000421756 A8MVJ9 347 aa12.48□□□□□ -0.41
MCF2L-213ENST00000421756 HOXB6P17509 224 aaKnown RBP12.48□□□□□ -0.41
MCF2L-213ENST00000421756 PKLRP30613 574 aa12.48□□□□□ -0.41
MCF2L-213ENST00000421756 NTSR1P30989 418 aa12.48□□□□□ -0.41
MCF2L-213ENST00000421756 IFNA8P32881 189 aa12.48□□□□□ -0.41
MCF2L-213ENST00000421756 GABRA3P34903 492 aa12.48□□□□□ -0.41
MCF2L-213ENST00000421756 GCGRP47871 477 aa12.48□□□□□ -0.41
MCF2L-213ENST00000421756 KCNJ8Q15842 424 aa12.48□□□□□ -0.41
MCF2L-213ENST00000421756 PDZK1Q5T2W1 519 aa12.48□□□□□ -0.41
MCF2L-213ENST00000421756 SLC48A1Q6P1K1 146 aa12.48□□□□□ -0.41
MCF2L-213ENST00000421756 RPTNQ6XPR3 784 aa12.48□□□□□ -0.41
MCF2L-213ENST00000421756 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms