RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 OR9A2Q8NGT5 310 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 TMEM171Q8WVE6 324 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 ATP6V1E2Q96A05 226 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 EFHD2Q96C19 240 aaPredicted RBP12.77□□□□□ -0.37
NFE4-201ENST00000420058 FOLH1BQ9HBA9 442 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 UTS2RQ9UKP6 389 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 PSME2Q9UL46 239 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 PROCRQ9UNN8 238 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 SLC12A4Q9UP95 1085 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 SAR1BQ9Y6B6 198 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 CR1P17927 2039 aa12.77□□□□□ -0.37
NFE4-201ENST00000420058 HS3ST1O14792 307 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 RAD51CO43502 376 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 IL11P20809 199 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 EEFSECP57772 596 aaKnown RBP12.76□□□□□ -0.37
NFE4-201ENST00000420058 TRA2BP62995 288 aaKnown RBP12.76□□□□□ -0.37
NFE4-201ENST00000420058 PSG6Q00889 435 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 OCRLQ01968 901 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 IFT88Q13099 833 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 NAB1Q13506 487 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 EXOC3L2Q2M3D2 409 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 TTC19Q6DKK2 380 aaPredicted RBP12.76□□□□□ -0.37
NFE4-201ENST00000420058 HMBOX1Q6NT76 420 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 LETMD1Q6P1Q0 360 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 ZDHHC24Q6UX98 284 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 MILR1Q7Z6M3 343 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 GGNQ86UU5 652 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 C1orf52Q8N6N3 182 aaKnown RBP12.76□□□□□ -0.37
NFE4-201ENST00000420058 OR7G2Q8NG99 324 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 ERP27Q96DN0 273 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 PLPPR2Q96GM1 343 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 KCNF1Q9H3M0 494 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 CXorf56Q9H5V9 222 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 METRNQ9UJH8 293 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 ZNF780BQ9Y6R6 833 aa12.76□□□□□ -0.37
NFE4-201ENST00000420058 FAM187AA6NFU0 413 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 RNF212BA8MTL3 300 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 STX16-NPEPL1H3BU86 382 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 STX16O14662 325 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 SEC14L5O43304 696 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 ZSCAN12O43309 604 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 SCO2O43819 266 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 PLOD3O60568 738 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 BCAS2O75934 225 aaPredicted RBP12.75□□□□□ -0.37
NFE4-201ENST00000420058 CHN1P15882 459 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 EVI2BP34910 448 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 ALDH9A1P49189 494 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 PLTPP55058 493 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 RAE1P78406 368 aaKnown RBP12.75□□□□□ -0.37
NFE4-201ENST00000420058 CALCOCO2Q13137 446 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 FGFBP1Q14512 234 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 CLEC12BQ2HXU8 276 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 FREM1Q5H8C1 2179 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 UBAP2Q5T6F2 1119 aaKnown RBP12.75□□□□□ -0.37
NFE4-201ENST00000420058 RAET1LQ5VY80 246 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 DNM1P46Q6ZS02 220 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 SLC44A2Q8IWA5 706 aaPredicted RBP12.75□□□□□ -0.37
NFE4-201ENST00000420058 TMEM151AQ8N4L1 468 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 UHMK1Q8TAS1 419 aaKnown RBP12.75□□□□□ -0.37
NFE4-201ENST00000420058 RAB3IL1Q8TBN0 382 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 FBXO25Q8TCJ0 367 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 DUSP19Q8WTR2 217 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 MRRFQ96E11 262 aaKnown RBP12.75□□□□□ -0.37
NFE4-201ENST00000420058 C1GALT1C1Q96EU7 318 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 HBEGFQ99075 208 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 REG4Q9BYZ8 158 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 ELOVL6Q9H5J4 265 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 BRF2Q9HAW0 419 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 PPP4R1LQ9P1A2 415 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 CLEC4AQ9UMR7 237 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 LAMP3Q9UQV4 416 aa12.75□□□□□ -0.37
NFE4-201ENST00000420058 SHISA8B8ZZ34 492 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 LINC01387J3KSC0 135 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 SOD3P08294 240 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 RPS17P08708 135 aaKnown RBP12.74□□□□□ -0.37
NFE4-201ENST00000420058 SBK3P0C264 359 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 DANCRP0C864 163 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 PPP3CBP16298 524 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 TSPAN8P19075 237 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 IL12BP29460 328 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 STX2P32856 288 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 ARL1P40616 181 aaPredicted RBP12.74□□□□□ -0.37
NFE4-201ENST00000420058 CDH13P55290 713 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 DMTNQ08495 405 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 ZNF844Q08AG5 666 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 GLYR1Q49A26 553 aaPredicted RBP12.74□□□□□ -0.37
NFE4-201ENST00000420058 TCHHL1Q5QJ38 904 aaPredicted RBP12.74□□□□□ -0.37
NFE4-201ENST00000420058 ADAM5Q6NVV9 412 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 APOOLQ6UXV4 268 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 HIPK1Q86Z02 1210 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 SELENOMQ8WWX9 145 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.37
NFE4-201ENST00000420058 ADGRG7Q96K78 797 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 NPAS1Q99742 590 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 FAIM2Q9BWQ8 316 aa12.74□□□□□ -0.37
NFE4-201ENST00000420058 H3BML4 177 aa12.73□□□□□ -0.37
NFE4-201ENST00000420058 IL3P08700 152 aa12.73□□□□□ -0.37
NFE4-201ENST00000420058 TYK2P29597 1187 aa12.73□□□□□ -0.37
NFE4-201ENST00000420058 MAGEA12P43365 314 aa12.73□□□□□ -0.37
NFE4-201ENST00000420058 GNG11P61952 73 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms