RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TRAPPC13A5PLN9 417 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SYNDIG1LA6NDD5 238 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SAGE2PA6NJ88 616 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 TMX2-CTNND1H3BSU7 103 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MYL12BO14950 172 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ENTPD6O75354 484 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SOX14O95416 240 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 RAB36O95755 333 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 PTHP01270 115 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 HMGN1P05114 100 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CDH3P22223 829 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CD38P28907 300 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CD40LGP29965 261 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SOX6P35712 828 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 LIMK1P53667 647 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 PSMD4P55036 377 aaKnown RBP13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 VBP1P61758 197 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 COPZ1P61923 177 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 EEF1A1P68104 462 aaKnown RBP13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 IGLV3-21P80748 117 aaPredicted RBP13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SHC2P98077 582 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 EFNB1P98172 346 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MLLT11Q13015 90 aaPredicted RBP13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 RGS21Q2M5E4 152 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 PRTGQ2VWP7 1150 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ZNF404Q494X3 552 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 C3orf38Q5JPI3 329 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 COMTD1Q86VU5 262 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 VRK2Q86Y07 508 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 GRAMD2AQ8IUY3 354 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ZNF687Q8N1G0 1237 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 VWA5B2Q8N398 1253 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ARHGEF39Q8N4T4 335 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 OR6C4Q8NGE1 309 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 OR6Q1Q8NGQ2 317 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 WDR36Q8NI36 951 aaKnown RBP13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 NDNFQ8TB73 568 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ZNF285Q96NJ3 590 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MCHR1Q99705 422 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SLIRPQ9GZT3 109 aaKnown RBP13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SCN3AQ9NY46 2000 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ETAA1Q9NY74 926 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MAT2BQ9NZL9 334 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CLCA2Q9UQC9 943 aa13.57□□□□□ -0.24
HLA-DPA1-242ENST00000419277 TMEM129A0AVI4 362 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 TAF4O00268 1085 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CLDN4O14493 209 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ZNF749O43361 778 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 FGF17O60258 216 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 NKX2-2O95096 273 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 NSA2O95478 260 aaKnown RBP13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 EIF2S1P05198 315 aaKnown RBP13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ACP2P11117 423 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MYL12AP19105 171 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 TNNI3P19429 210 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 NT5EP21589 574 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 OMPP47874 163 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 LSSP48449 732 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 POU6F2P78424 691 aaPredicted RBP13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 GINS1Q14691 196 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SMAD2Q15796 467 aaKnown RBP13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MINDY4Q4G0A6 757 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SYT14P1Q58G82 188 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 C6orf132Q5T0Z8 1188 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ARMC4Q5T2S8 1044 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 TMEM236Q5W0B7 351 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ZNF613Q6PF04 617 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 Q6ZS52 159 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CMIPQ8IY22 773 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 TCEANCQ8N8B7 351 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CHPT1Q8WUD6 406 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 PATE1Q8WXA2 126 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SLC41A3Q96GZ6 507 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 LMF2Q9BU23 707 aaKnown RBP13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 TAPBPLQ9BX59 468 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 NXF2Q9GZY0 626 aaKnown RBP13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 UBE2ZQ9H832 354 aaPredicted RBP13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 AMBNQ9NP70 447 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CHCHD3Q9NX63 227 aaKnown RBP13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 PCDHGA3Q9Y5H0 932 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 HEMK1Q9Y5R4 338 aaPredicted RBP13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 KCNE3Q9Y6H6 103 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CDH10Q9Y6N8 788 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 CDHR4A6H8M9 788 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 METTL12A8MUP2 240 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 NARSO43776 548 aaKnown RBP13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MAN1A2O60476 641 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 BRINP1O60477 761 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 PSMA1P25786 263 aaKnown RBP13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 AVPR1BP47901 424 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 VSX2P58304 361 aaPredicted RBP13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 HNRNPKP61978 463 aaKnown RBP eCLIP13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 NCS1P62166 190 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SPHARQ15513 63 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MED22Q15528 200 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 SYT16Q17RD7 645 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 ZNF836Q6ZNA1 936 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 Q6ZNX1 250 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 MED25Q71SY5 747 aa13.56□□□□□ -0.24
HLA-DPA1-242ENST00000419277 C17orf82Q86X59 251 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms