RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PLD1Q13393 1074 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 HTR4Q13639 388 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 PODNL1Q6PEZ8 512 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 SMARCD3Q6STE5 483 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 MRGPREQ86SM8 312 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 APOBEC3FQ8IUX4 373 aaKnown RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 CDH26Q8IXH8 852 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 HAVCR2Q8TDQ0 301 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 SPRYD4Q8WW59 207 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 PTGFRNQ9P2B2 879 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 CFAP97Q9P2B7 532 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 KLHL42Q9P2K6 505 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 CRLS1Q9UJA2 301 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 USP34Q70CQ2 3546 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 H0YIV9 168 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 SULT1B1O43704 296 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 GPR37L1O60883 481 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 CPN1P15169 458 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 VIPR1P32241 457 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 TRIM23P36406 574 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 GPR15P49685 360 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 CCL23P55773 120 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 PITPNAQ00169 270 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 RING1Q06587 406 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 GK2Q14410 553 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 RNASE12Q5GAN4 147 aaKnown RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 RPS26P11Q5JNZ5 115 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 CD300LGQ6UXG3 332 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 RBM45Q8IUH3 476 aaKnown RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 HORMAD2Q8N7B1 307 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 OR4F15Q8NGB8 312 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 OR51Q1Q8NH59 317 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 ASB11Q8WXH4 323 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 LINC00597Q9H2U6 94 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 CA10Q9NS85 328 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 NKIRAS2Q9NYR9 191 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 MARK1Q9P0L2 795 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 PPP2R3BQ9Y5P8 575 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 A0A0U1RQF3 1178 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 A0A1W2PRQ8 180 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 OR2M5A3KFT3 312 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC9B1P1A6NJY1 282 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 ARHGEF33A8MVX0 844 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 LRRN3E7EW58 273 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 CACNB4O00305 520 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 RNF13O43567 381 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 SH3BGRLO75368 114 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 OR2A4O95047 310 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 OR4Q2P0C623 313 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF8P17098 575 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 CCR7P32248 378 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 OR10A3P58181 314 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 SEC61A1P61619 476 aaKnown RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 FZD5Q13467 585 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 ENTPD8Q5MY95 495 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 C10orf120Q5SQS8 335 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF704Q6ZNC4 412 aaPredicted RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 TMUB2Q71RG4 321 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 KLBQ86Z14 1044 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 FAM98AQ8NCA5 519 aaKnown RBP7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 C7orf57Q8NEG2 295 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 GPR156Q8NFN8 814 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 OR6J1Q8NGC5 347 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 OR4D11Q8NGI4 311 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 OR2A7Q96R45 310 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 GPA33Q99795 319 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 PLA2G12AQ9BZM1 189 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 SEMA4CQ9C0C4 833 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 ATG10Q9H0Y0 220 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 LRRN3Q9H3W5 708 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 MTG2Q9H4K7 406 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 BIN3Q9NQY0 253 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 BABAM2Q9NXR7 383 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 SEC14L3Q9UDX4 400 aa7.54□□□□□ -1.2
HMGXB4-202ENST00000418170 GSAPA4D1B5 854 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 H3BNC9 293 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 IGHA1P01876 353 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 MAPK9P45984 424 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 VEGFCP49767 419 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 CDH11P55287 796 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 E2F1Q01094 437 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 UBXN2BQ14CS0 331 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 ADNP2Q6IQ32 1131 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 CXorf57Q6NSI4 855 aaKnown RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF322Q6U7Q0 402 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 RAB11FIP2Q7L804 512 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 TECPR1Q7Z6L1 1165 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 NXPE1Q8N323 547 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 OR4K5Q8NGD3 323 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 GNPDA2Q8TDQ7 276 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 MRPS31Q92665 395 aaKnown RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 ZFP3Q96NJ6 502 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 PARK7Q99497 189 aaKnown RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 IFT27Q9BW83 186 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 SMG9Q9H0W8 520 aaKnown RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 EXOSC3Q9NQT5 275 aaKnown RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 NANSQ9NR45 359 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 TEX10Q9NXF1 929 aaPredicted RBP7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 A4GNTQ9UNA3 340 aa7.53□□□□□ -1.2
HMGXB4-202ENST00000418170 FLVCR2Q9UPI3 526 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms