RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ZIC3O60481 467 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 TRIM13O60858 407 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 RCBTB2O95199 551 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 PSMG1O95456 288 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 NEFHP12036 1026 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 LHX2P50458 406 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 PSMD4P55036 377 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 EEF1A1P68104 462 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 GAB1Q13480 694 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 BCL2A1Q16548 175 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 EEF1A1P5Q5VTE0 462 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 CLEC6AQ6EIG7 209 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 RNF165Q6ZSG1 346 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 ZNF764Q96H86 408 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 EGLN2Q96KS0 407 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 GPATCH1Q9BRR8 931 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 LMF2Q9BU23 707 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 SFXN3Q9BWM7 321 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 GATA5Q9BWX5 397 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 IQCGQ9H095 443 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 ACBD3Q9H3P7 528 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 ABCG2Q9UNQ0 655 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 AKAP6Q13023 2319 aa15.95■□□□□ 0.14
PDLIM2-208ENST00000416159 MED12LQ86YW9 2145 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 TLDC2A0PJX2 215 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 TUBAL3A6NHL2 446 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 A6NNC1 897 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 EEF1E1-BLOC1S5C9J1V9 151 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 EEF1E1O43324 174 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 SCO2O43819 266 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 IL33O95760 270 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 CHEK2O96017 543 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 ZNF708P17019 499 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 TACR1P25103 407 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 CLK3P49761 638 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 ART1P52961 327 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 CLDN18P56856 261 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 SORDQ00796 357 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 PCLAFQ15004 111 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 DAZAP2Q15038 168 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 Q6ZSR9 355 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 FADS6Q8N9I5 356 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 NINJ1Q92982 152 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 CCT7Q99832 543 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 CLEC4MQ9H2X3 399 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 DSN1Q9H410 356 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 EDARQ9UNE0 448 aa15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 RPH3AQ9Y2J0 694 aaPredicted RBP15.94■□□□□ 0.14
PDLIM2-208ENST00000416159 PDPK1O15530 556 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 TBX19O60806 448 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 EPXP11678 715 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 PRPS2P11908 318 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 PEPDP12955 493 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 FOXF2Q12947 444 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 GANABQ14697 944 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 CHMP1BQ7LBR1 199 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 ZNF551Q7Z340 670 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 GRAMD2AQ8IUY3 354 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 RIBC1Q8N443 379 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 OR2M3Q8NG83 312 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 CEP70Q8NHQ1 597 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 GOT1L1Q8NHS2 421 aaPredicted RBP15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 ZFP28Q8NHY6 868 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 NRGNQ92686 78 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 GFM2Q969S9 779 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 INTS12Q96CB8 462 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 FCRL1Q96LA6 429 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 G6PC3Q9BUM1 346 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 PIGMQ9H3S5 423 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 REEP4Q9H6H4 257 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 PTGES2Q9H7Z7 377 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 FAM120CQ9NX05 1096 aaKnown RBP15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 MKS1Q9NXB0 559 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 CLCF1Q9UBD9 225 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 TMED5Q9Y3A6 229 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 FIS1Q9Y3D6 152 aa15.93■□□□□ 0.14
PDLIM2-208ENST00000416159 B4DXG7 233 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 LINC01387J3KSC0 135 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 HCRTR2O43614 444 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 FGF4P08620 206 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 HK1P19367 917 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 GABRA3P34903 492 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 GPC1P35052 558 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 IST1P53990 364 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 B3GALT5-AS1P59052 145 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 KANK2Q63ZY3 851 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 OR2T11Q8NH01 316 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 PPCDCQ96CD2 204 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 ZBED6CLQ96FA7 236 aaPredicted RBP15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 APOPT1Q96IL0 206 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 RBM24Q9BX46 236 aaKnown RBP15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 TUBB1Q9H4B7 451 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 MED11Q9P086 117 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 PTGDR2Q9Y5Y4 395 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 AKAP9Q99996 3911 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 PCNX3Q9H6A9 2034 aa15.92■□□□□ 0.14
PDLIM2-208ENST00000416159 C17orf51A8MQB3 221 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 AKAP10O43572 662 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 NPHS1O60500 1241 aa15.91■□□□□ 0.14
PDLIM2-208ENST00000416159 GOSR1O95249 250 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms