RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 NKAIN3Q8N8D7 197 aa19.21■□□□□ 0.67
AP1S3-205ENST00000415298 BPIFCQ8NFQ6 507 aa19.21■□□□□ 0.67
AP1S3-205ENST00000415298 APH1BQ8WW43 257 aa19.21■□□□□ 0.67
AP1S3-205ENST00000415298 KAT2AQ92830 837 aa19.21■□□□□ 0.67
AP1S3-205ENST00000415298 PHF7Q9BWX1 381 aaPredicted RBP19.21■□□□□ 0.67
AP1S3-205ENST00000415298 ENKD1Q9H0I2 346 aa19.21■□□□□ 0.67
AP1S3-205ENST00000415298 PIF1Q9H611 641 aa19.21■□□□□ 0.67
AP1S3-205ENST00000415298 KCNK12Q9HB15 430 aa19.21■□□□□ 0.67
AP1S3-205ENST00000415298 RBM22Q9NW64 420 aaKnown RBP eCLIP19.21■□□□□ 0.67
AP1S3-205ENST00000415298 KLHL8Q9P2G9 620 aaPredicted RBP19.21■□□□□ 0.67
AP1S3-205ENST00000415298 BTRCQ9Y297 605 aa19.21■□□□□ 0.67
AP1S3-205ENST00000415298 A0A0C4DFX4 3053 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 ISM1B1AKI9 464 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 K7ERQ8 282 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 SGK494L7N484 410 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 CASC3O15234 703 aaKnown RBP19.2■□□□□ 0.66
AP1S3-205ENST00000415298 MATN4O95460 622 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 SIX6O95475 246 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 NFATC1O95644 943 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 LGI1O95970 557 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 SDHAP31040 664 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 CRISP3P54108 245 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 USP30Q70CQ3 517 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 NUDT13Q86X67 352 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 ZNF383Q8NA42 475 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 ROBO4Q8WZ75 1007 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 EML4Q9HC35 981 aaKnown RBP19.2■□□□□ 0.66
AP1S3-205ENST00000415298 AKAP7Q9P0M2 348 aaPredicted RBP19.2■□□□□ 0.66
AP1S3-205ENST00000415298 KLHL9Q9P2J3 617 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 POLR3HQ9Y535 204 aaPredicted RBP19.2■□□□□ 0.66
AP1S3-205ENST00000415298 A0A0A0MRY4 1105 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 GPR31O00270 319 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 AGR2O95994 175 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 HPP00738 406 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 IL10RBQ08334 325 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 TSTQ16762 297 aaKnown RBP19.2■□□□□ 0.66
AP1S3-205ENST00000415298 CCDC117Q8IWD4 279 aaPredicted RBP19.2■□□□□ 0.66
AP1S3-205ENST00000415298 DCUN1D3Q8IWE4 304 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 PGBD5Q8N414 524 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 SORCS1Q8WY21 1168 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 SPATA13Q96N96 652 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 UBP1Q9NZI7 540 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 NUBP2Q9Y5Y2 271 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 F5P12259 2224 aa19.2■□□□□ 0.66
AP1S3-205ENST00000415298 URADA6NGE7 173 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 HLA-DQB2P05538 268 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 PAX6P26367 422 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 SLC6A1P30531 599 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 GLRBP48167 497 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 SMAD1Q15797 465 aaKnown RBP19.19■□□□□ 0.66
AP1S3-205ENST00000415298 GPRC6AQ5T6X5 926 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 IER5LQ5T953 404 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 MLIPQ5VWP3 458 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 HSDL2Q6YN16 418 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 PRSS58Q8IYP2 241 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 OR2T35Q8NGX2 323 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 LRR1Q96L50 414 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 LRFN5Q96NI6 719 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 CAMK1GQ96NX5 476 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 SEMA6CQ9H3T2 930 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 ACTR8Q9H981 624 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 EXOSC4Q9NPD3 245 aaKnown RBP19.19■□□□□ 0.66
AP1S3-205ENST00000415298 EIF2B4Q9UI10 523 aaKnown RBP19.19■□□□□ 0.66
AP1S3-205ENST00000415298 NEMP2A6NFY4 417 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 CACNG3O60359 315 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 VPS4BO75351 444 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 AKR7A3O95154 331 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 IFNA2P01563 188 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 CISD3P0C7P0 127 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 MLNP12872 115 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 ITPKAP23677 461 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 PSMB4P28070 264 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 GJA4P35212 333 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 KIR3DL2P43630 455 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 CRADDP78560 199 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 EMX2Q04743 252 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 OLIG2Q13516 323 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 PDGFRLQ15198 375 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 MARC1Q5VT66 337 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 GDPGP1Q6ZNW5 385 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 MTSS1LQ765P7 747 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 ADIPOR2Q86V24 386 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 FJX1Q86VR8 437 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 NAXDQ8IW45 347 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 ETFBKMTQ8IXQ9 262 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 FSTL5Q8N475 847 aaPredicted RBP19.19■□□□□ 0.66
AP1S3-205ENST00000415298 FAM86B1Q8N7N1 296 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 MAFAQ8NHW3 353 aaPredicted RBP19.19■□□□□ 0.66
AP1S3-205ENST00000415298 UBE2FQ969M7 185 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 SLAMF9Q96A28 289 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 COL26A1Q96A83 441 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 TADA1Q96BN2 335 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 CERS2Q96G23 380 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 HHIPQ96QV1 700 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 SPACA1Q9HBV2 294 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 NT5MQ9NPB1 228 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 SLC52A3Q9NQ40 469 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 IMP3Q9NV31 184 aaKnown RBP19.19■□□□□ 0.66
AP1S3-205ENST00000415298 GFOD1Q9NXC2 390 aa19.19■□□□□ 0.66
AP1S3-205ENST00000415298 MIA3Q5JRA6 1907 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms