RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 B4DXG7 233 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 TRIM49D1C9J1S8 452 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 C16orf97H3BN30 126 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 CCKARP32238 428 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 KIR2DL2P43627 348 aaPredicted RBP17.43■□□□□ 0.38
UBXN4-202ENST00000415164 SERPINB9P50453 376 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 SUCLG1P53597 346 aaKnown RBP17.43■□□□□ 0.38
UBXN4-202ENST00000415164 EEFSECP57772 596 aaKnown RBP17.43■□□□□ 0.38
UBXN4-202ENST00000415164 B3GALT5-AS1P59052 145 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 PPP2R2BQ00005 443 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 CLCQ05315 142 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 ACSM2AQ08AH3 577 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 HEPACAMQ14CZ8 416 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 BCL2A1Q16548 175 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 ACSM2BQ68CK6 577 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 SYT10Q6XYQ8 523 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 ZNF610Q8N9Z0 462 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 OR7G2Q8NG99 324 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 FNDC9Q8TBE3 224 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 MRPS18CQ9Y3D5 142 aaKnown RBP17.43■□□□□ 0.38
UBXN4-202ENST00000415164 ZNF337Q9Y3M9 751 aa17.43■□□□□ 0.38
UBXN4-202ENST00000415164 KIAA1324LA8MWY0 1029 aaPredicted RBP17.42■□□□□ 0.38
UBXN4-202ENST00000415164 HSD17B3P37058 310 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 MAGEA12P43365 314 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 GAS1P54826 345 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 CSTF3Q12996 717 aaKnown RBP17.42■□□□□ 0.38
UBXN4-202ENST00000415164 PON3Q15166 354 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 RASA2Q15283 850 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 SGCBQ16585 318 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 PRIMA1Q86XR5 153 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 SAMD14Q8IZD0 417 aaPredicted RBP17.42■□□□□ 0.38
UBXN4-202ENST00000415164 OR2M3Q8NG83 312 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 METTL6Q8TCB7 284 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 C16orf78Q8WTQ4 265 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 APIPQ96GX9 242 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 PRRG4Q9BZD6 226 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 CDC42EP4Q9H3Q1 356 aaKnown RBP17.42■□□□□ 0.38
UBXN4-202ENST00000415164 PTGES2Q9H7Z7 377 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 SLC35C2Q9NQQ7 365 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 ZDHHC18Q9NUE0 388 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 ELOVL5Q9NYP7 299 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 FLRT3Q9NZU0 649 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 DMGDHQ9UI17 866 aaKnown RBP17.42■□□□□ 0.38
UBXN4-202ENST00000415164 ZNF225Q9UK10 706 aa17.42■□□□□ 0.38
UBXN4-202ENST00000415164 MED12LQ86YW9 2145 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 INAFM1C9JVW0 142 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 COQ9O75208 318 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 ULK1O75385 1050 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 JUNP05412 331 aaKnown RBP17.41■□□□□ 0.38
UBXN4-202ENST00000415164 COL6A2P12110 1019 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 HSD3B1P14060 373 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 TAC1P20366 129 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 HSD3B2P26439 372 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 MPIP34949 423 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 CLK3P49761 638 aaKnown RBP17.41■□□□□ 0.38
UBXN4-202ENST00000415164 HTR6P50406 440 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 NCBP2P52298 156 aaKnown RBP eCLIP17.41■□□□□ 0.381e-8■□□□□ 9.5
UBXN4-202ENST00000415164 RAE1P78406 368 aaKnown RBP17.41■□□□□ 0.38
UBXN4-202ENST00000415164 LGSNQ5TDP6 509 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 ALKBH2Q6NS38 261 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 TMEM107Q6UX40 140 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 C20orf204Q6ZNR8 217 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 GPRIN3Q6ZVF9 776 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 C17orf53Q8N3J3 647 aaPredicted RBP17.41■□□□□ 0.38
UBXN4-202ENST00000415164 ERP27Q96DN0 273 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 ACPTQ9BZG2 426 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 STMN4Q9H169 189 aaPredicted RBP17.41■□□□□ 0.38
UBXN4-202ENST00000415164 SDHAF3Q9NRP4 125 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 NFU1Q9UMS0 254 aa17.41■□□□□ 0.38
UBXN4-202ENST00000415164 OR2M5A3KFT3 312 aa17.4■□□□□ 0.38
UBXN4-202ENST00000415164 SHISA8B8ZZ34 492 aa17.4■□□□□ 0.38
UBXN4-202ENST00000415164 EMC8O43402 210 aa17.4■□□□□ 0.38
UBXN4-202ENST00000415164 PLGP00747 810 aaPredicted RBP17.4■□□□□ 0.38
UBXN4-202ENST00000415164 CTAGE8P0CG41 777 aa17.4■□□□□ 0.38
UBXN4-202ENST00000415164 TIA1P31483 386 aaKnown RBP eCLIP17.4■□□□□ 0.38
UBXN4-202ENST00000415164 CLDN15P56746 228 aa17.4■□□□□ 0.38
UBXN4-202ENST00000415164 CLDN20P56880 219 aa17.4■□□□□ 0.38
UBXN4-202ENST00000415164 RPS3AP61247 264 aaKnown RBP17.4■□□□□ 0.38
UBXN4-202ENST00000415164 PSPHP78330 225 aa17.4■□□□□ 0.38
UBXN4-202ENST00000415164 SPIN4Q56A73 249 aa17.4■□□□□ 0.38
UBXN4-202ENST00000415164 SPDYAQ5MJ70 313 aa17.4■□□□□ 0.38
UBXN4-202ENST00000415164 MARCH3Q86UD3 253 aa17.4■□□□□ 0.38
UBXN4-202ENST00000415164 CTAGE4Q8IX94 777 aa17.4■□□□□ 0.38
UBXN4-202ENST00000415164 FADS6Q8N9I5 356 aa17.4■□□□□ 0.38
UBXN4-202ENST00000415164 CLEC4AQ9UMR7 237 aa17.4■□□□□ 0.38
UBXN4-202ENST00000415164 NSD1Q96L73 2696 aaPredicted RBP17.4■□□□□ 0.38
UBXN4-202ENST00000415164 FN1P02751 2386 aaKnown RBP17.39■□□□□ 0.38
UBXN4-202ENST00000415164 PLOD3O60568 738 aa17.39■□□□□ 0.37
UBXN4-202ENST00000415164 TNFRSF21O75509 655 aa17.39■□□□□ 0.37
UBXN4-202ENST00000415164 ANXA4P09525 319 aaPredicted RBP17.39■□□□□ 0.37
UBXN4-202ENST00000415164 SBK3P0C264 359 aa17.39■□□□□ 0.37
UBXN4-202ENST00000415164 PTH2RP49190 550 aa17.39■□□□□ 0.37
UBXN4-202ENST00000415164 C2orf80Q0P641 193 aa17.39■□□□□ 0.37
UBXN4-202ENST00000415164 FGFBP1Q14512 234 aa17.39■□□□□ 0.37
UBXN4-202ENST00000415164 GANABQ14697 944 aaKnown RBP17.39■□□□□ 0.37
UBXN4-202ENST00000415164 DECR1Q16698 335 aa17.39■□□□□ 0.37
UBXN4-202ENST00000415164 UNC50Q53HI1 259 aa17.39■□□□□ 0.37
UBXN4-202ENST00000415164 PRSS57Q6UWY2 283 aa17.39■□□□□ 0.37
UBXN4-202ENST00000415164 PLEKHM3Q6ZWE6 761 aa17.39■□□□□ 0.37
UBXN4-202ENST00000415164 DUSP19Q8WTR2 217 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms