RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 LANCL1O43813 399 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 LCMT2O60294 686 aaKnown RBP9.18□□□□□ -0.94
CD44-206ENST00000415148 SLC43A1O75387 559 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 IGHA1P01876 353 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 GPR89BP0CG08 455 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 TFPIP10646 304 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 UQCRC1P31930 480 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 SSR2P43308 183 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 OMPP47874 163 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 RNF144AP50876 292 aaPredicted RBP9.18□□□□□ -0.94
CD44-206ENST00000415148 CDH11P55287 796 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 CLDN20P56880 219 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 PRDX1Q06830 199 aaKnown RBP9.18□□□□□ -0.94
CD44-206ENST00000415148 FUT5Q11128 374 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 ZNF311Q5JNZ3 666 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 LHFPL3Q86UP9 236 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 C7orf57Q8NEG2 295 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 PIGXQ8TBF5 258 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 DNAJA4Q8WW22 397 aaPredicted RBP9.18□□□□□ -0.94
CD44-206ENST00000415148 DIO2Q92813 273 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 MARVELD1Q9BSK0 173 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 TRIM45Q9H8W5 580 aaPredicted RBP9.18□□□□□ -0.94
CD44-206ENST00000415148 MAT2BQ9NZL9 334 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 SLC13A4Q9UKG4 626 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 ACSL5Q9ULC5 683 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 HSPB11Q9Y547 144 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 PCYT1BQ9Y5K3 369 aaPredicted RBP9.18□□□□□ -0.94
CD44-206ENST00000415148 COL4A3Q01955 1670 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 DENND4AQ7Z401 1863 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 CDH23Q9H251 3354 aa9.18□□□□□ -0.94
CD44-206ENST00000415148 SURF4O15260 269 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 EMC8O43402 210 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 TSC22D2O75157 780 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 ADH1CP00326 375 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 C1QBP02746 253 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 HMGN1P05114 100 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 HMGN2P05204 90 aaKnown RBP9.17□□□□□ -0.94
CD44-206ENST00000415148 PTNP21246 168 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 ENPP1P22413 925 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 FPR3P25089 353 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 HTR1FP30939 366 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 IL12RB1P42701 662 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 TSFMP43897 325 aaKnown RBP9.17□□□□□ -0.94
CD44-206ENST00000415148 ABATP80404 500 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 PRR5P85299 388 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 C19orf57Q0VDD7 668 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 ZNF155Q12901 538 aaPredicted RBP9.17□□□□□ -0.94
CD44-206ENST00000415148 MRM1Q6IN84 353 aaKnown RBP9.17□□□□□ -0.94
CD44-206ENST00000415148 SZRD1Q7Z422 152 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 NR2C2APQ86WQ0 139 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 AMER3Q8N944 861 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 OR8D4Q8NGM9 314 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 PCNPQ8WW12 178 aaKnown RBP9.17□□□□□ -0.94
CD44-206ENST00000415148 ACOT11Q8WXI4 607 aaPredicted RBP9.17□□□□□ -0.94
CD44-206ENST00000415148 ZSWIM3Q96MP5 696 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 DEFB118Q96PH6 123 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 UBL7Q96S82 380 aaPredicted RBP9.17□□□□□ -0.94
CD44-206ENST00000415148 HDAC8Q9BY41 377 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 C11orf49Q9H6J7 331 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 NLGN3Q9NZ94 848 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 MOSPD1Q9UJG1 213 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 GSAPA4D1B5 854 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 GABRPO00591 440 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 ARHGEF9O43307 516 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 LYRM1O43325 122 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 OR2B3O76000 313 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 PAHP00439 452 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 SLC35G4P0C7Q5 338 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 ACP5P13686 325 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 PSMB5P28074 263 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 PRKAR1BP31321 381 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 PRKAG1P54619 331 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 MLLT1Q03111 559 aaPredicted RBP9.17□□□□□ -0.94
CD44-206ENST00000415148 TGM3Q08188 693 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 WSCD2Q2TBF2 565 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 FNDC3BQ53EP0 1204 aaKnown RBP9.17□□□□□ -0.94
CD44-206ENST00000415148 IL20RBQ6UXL0 311 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 MRPL43Q8N983 215 aaKnown RBP9.17□□□□□ -0.94
CD44-206ENST00000415148 NEIL3Q8TAT5 605 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 SUN5Q8TC36 379 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 OTULINQ96BN8 352 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 C17orf62Q9BQA9 187 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 ZNF649Q9BS31 505 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 WACQ9BTA9 647 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 TMED9Q9BVK6 235 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 RAB11FIP5Q9BXF6 653 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 RNF32Q9H0A6 362 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 PRDM7Q9NQW5 492 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 ING3Q9NXR8 418 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 KLHL28Q9NXS3 571 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 PRKAB1Q9Y478 270 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 UNC80Q8N2C7 3258 aa9.17□□□□□ -0.94
CD44-206ENST00000415148 FAM240BA0A1B0GVZ2 78 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 CD8B2A6NJW9 211 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 LEUTXA8MZ59 168 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 ISM1B1AKI9 464 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 ORC5O43913 435 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 SYPP08247 313 aa9.16□□□□□ -0.94
CD44-206ENST00000415148 HNRNPA1P09651 372 aaKnown RBP eCLIP9.16□□□□□ -0.94
CD44-206ENST00000415148 LINC00271P0C7V0 271 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms