RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 EFHD2Q96C19 240 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-206ENST00000414829 NEURL3Q96EH8 262 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 JSRP1Q96MG2 331 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-206ENST00000414829 SLC35A5Q9BS91 424 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 TBL1XR1Q9BZK7 514 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 HOXD1Q9GZZ0 328 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 GPATCH2Q9NW75 528 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 WIF1Q9Y5W5 379 aa13.42□□□□□ -0.26
LIMS1-206ENST00000414829 A0A0G2JMM0 328 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 A0A1W2PPB8 328 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 A0A1W2PRS3 328 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 OR14I1A6ND48 311 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 KIR3DP1A8MWS1 328 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 G3V3Y1 287 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 SNPHO15079 494 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 HCN1O60741 890 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 KCNK2O95069 426 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 ZCCHC18P0CG32 403 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 ACP2P11117 423 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 ENDOUP21128 410 aaKnown RBP13.41□□□□□ -0.26
LIMS1-206ENST00000414829 GNLYP22749 145 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 MST1P26927 711 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 IL12AP29459 219 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 RFX3P48380 749 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 DGKQP52824 942 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 ARFIP2P53365 341 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 HPCAP84074 193 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 C6orf10Q5SRN2 563 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 SAXO2Q658L1 398 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 TIGD3Q6B0B8 471 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 ANGPTL8Q6UXH0 198 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 C6orf120Q7Z4R8 191 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 TMEM251Q8N6I4 163 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 OR1J4Q8NGS1 313 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 FBXO30Q8TB52 745 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 TSPEARQ8WU66 669 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 RNF138Q8WVD3 245 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 TMEM120AQ9BXJ8 343 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 RAD21L1Q9H4I0 556 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 POLE3Q9NRF9 147 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 THUMPD1Q9NXG2 353 aaKnown RBP13.41□□□□□ -0.26
LIMS1-206ENST00000414829 TUBA8Q9NY65 449 aaPredicted RBP13.41□□□□□ -0.26
LIMS1-206ENST00000414829 KLHL14Q9P2G3 628 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 C15orf41Q9Y2V0 281 aa13.41□□□□□ -0.26
LIMS1-206ENST00000414829 A0A1B0GUH1 482 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 LRRC3CA6NJW4 275 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 FAM166BA8MTA8 275 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 H3BNH8 94 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 NR5A2O00482 541 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 SCDO00767 359 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 SUSD5O60279 629 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 ICOSLGO75144 302 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 UTS2O95399 124 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 IGHG3P01860 377 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 CYP4B1P13584 511 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 ABOP16442 354 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 MATN1P21941 496 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 GDF1P27539 372 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 RFC3P40938 356 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 PER3P56645 1201 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 PHC1P78364 1004 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 GANABQ14697 944 aaKnown RBP13.4□□□□□ -0.26
LIMS1-206ENST00000414829 SLC10A1Q14973 349 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 CMPK2Q5EBM0 449 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 DCST2Q5T1A1 773 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 MTFR2Q6P444 385 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 BLOC1S3Q6QNY0 202 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 ZNF621Q6ZSS3 439 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 C16orf62Q7Z3J2 963 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 WDR53Q7Z5U6 358 aaPredicted RBP13.4□□□□□ -0.26
LIMS1-206ENST00000414829 OR4N2Q8NGD1 307 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 RFWD2Q8NHY2 731 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 PIK3R3Q92569 461 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 SPDL1Q96EA4 605 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 NODALQ96S42 347 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 LDAHQ9H6V9 325 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 ACKR4Q9NPB9 350 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 UBQLN4Q9NRR5 601 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 PLSCR2Q9NRY7 297 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 CCDC167Q9P0B6 97 aa13.4□□□□□ -0.26
LIMS1-206ENST00000414829 PINLYPA6NC86 204 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 TMEM247A6NEH6 219 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 C9JVG2 144 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 PRRG2O14669 202 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 BCKDKO14874 412 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 CDC40O60508 579 aaKnown RBP eCLIP13.39□□□□□ -0.27
LIMS1-206ENST00000414829 SLC19A2O60779 497 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 NME6O75414 186 aaPredicted RBP13.39□□□□□ -0.27
LIMS1-206ENST00000414829 CBR3O75828 277 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 GUSBP08236 651 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 STSP08842 583 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 PPIBP23284 216 aaKnown RBP13.39□□□□□ -0.27
LIMS1-206ENST00000414829 ADSLP30566 484 aaPredicted RBP13.39□□□□□ -0.27
LIMS1-206ENST00000414829 MAGEA5P43359 124 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 MAN2A2P49641 1150 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 MRPL49Q13405 166 aaKnown RBP13.39□□□□□ -0.27
LIMS1-206ENST00000414829 MAPRE2Q15555 327 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 AGKQ53H12 422 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 PLCZ1Q86YW0 608 aa13.39□□□□□ -0.27
LIMS1-206ENST00000414829 OR9I1Q8NGQ6 314 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms