RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 FAM110DQ8TAY7 271 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 NUBPLQ8TB37 319 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 M1APQ8TC57 530 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 DYNC2LI1Q8TCX1 351 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 SLC2A12Q8TD20 617 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 CA5BP1Q8WTZ4 195 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 LPAR1Q92633 364 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 GLYATL1Q969I3 302 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 SLC25A28Q96A46 364 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ARRDC3Q96B67 414 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 BIRC7Q96CA5 298 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 NXNL1Q96CM4 212 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 MMABQ96EY8 250 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ELMOD3Q96FG2 381 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 FAHD2AQ96GK7 314 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 SLC45A3Q96JT2 553 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 HARBI1Q96MB7 349 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ACCSQ96QU6 501 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 OR5M11Q96RB7 305 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 LGMNQ99538 433 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 MTERF1Q99551 399 aaKnown RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 NAPGQ99747 312 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 MAP3K3Q99759 626 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ADAM2Q99965 735 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 C20orf24Q9BUV8 137 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 MRI1Q9BV20 369 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 IFT27Q9BW83 186 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 TPSD1Q9BZJ3 242 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PPA2Q9H2U2 334 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PPP1R3EQ9H7J1 279 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 SIAEQ9HAT2 523 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ABCB9Q9NP78 766 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 FSCN3Q9NQT6 498 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 DYRK4Q9NR20 520 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PXMP2Q9NR77 195 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PIGVQ9NUD9 493 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 LIN7CQ9NUP9 197 aaKnown RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 NCKIPSDQ9NZQ3 722 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 TMEM9Q9P0T7 183 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 EPHA6Q9UF33 1036 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 MLXQ9UH92 298 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 KLHL21Q9UJP4 597 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PADI3Q9ULW8 664 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 COPS3Q9UNS2 423 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 SLC27A6Q9Y2P4 619 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ZDHHC9Q9Y397 364 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 PCDHB7Q9Y5E2 793 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 KPTNQ9Y664 436 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ALG6Q9Y672 507 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 THOC2Q8NI27 1593 aaKnown RBP3.38□□□□□ -1.87
SF3B1-203ENST00000414174 ATRNL1Q5VV63 1379 aa3.38□□□□□ -1.87
SF3B1-203ENST00000414174 NCOA1Q15788 1441 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 VPS8Q8N3P4 1428 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 RIMS2Q9UQ26 1411 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 FGD5Q6ZNL6 1462 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 KCNE1BA0A087WTH5 132 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 TRBV7-9A0A0J9YWB2 115 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 A0A0U1RRA0 63 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 A0A1B0GTI1 187 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 A0A1W2PPM1 405 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 FAM92AA1XBS5 289 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 VPS37CA5D8V6 355 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 TRABD2BA6NFA1 517 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SAGE2PA6NJ88 616 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ANKRD30BLA7E2S9 258 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF785A8K8V0 405 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF99A8MXY4 864 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 K7EP13 123 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 M0R296 226 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 PSMD12O00232 456 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 PDHXO00330 501 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 PPP6CO00743 305 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 MAN2B1O00754 1011 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CYB561D2O14569 222 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SGCEO43556 437 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SRPX2O60687 465 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SRP72O76094 671 aaKnown RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SOX30O94993 753 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CER1O95813 267 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 BCL10O95999 233 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 GSRP00390 522 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 SERPINA1P01009 418 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 CST1P01037 141 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 TCRBP04435 133 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 PCCAP05165 728 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 DCNP07585 359 aaKnown RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 RD3LP0DJH9 198 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 RRASP10301 218 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 MMP9P14780 707 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 KCNE1P15382 129 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 AMD1P17707 334 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ANXA7P20073 488 aaKnown RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 TPSB2P20231 275 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 DRD1P21728 446 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 COMTP21964 271 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 PCMT1P22061 227 aa3.37□□□□□ -1.87
SF3B1-203ENST00000414174 FBLP22087 321 aaKnown RBP3.37□□□□□ -1.87
SF3B1-203ENST00000414174 ELK4P28324 431 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms