RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 TXNL4AP83876 142 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 ZNF787Q6DD87 383 aa15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 MICU2Q8IYU8 434 aa15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 OR52N2Q8NGI0 321 aa15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 SFXN5Q8TD22 340 aa15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 NEURL3Q96EH8 262 aa15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 CNRIP1Q96F85 164 aaPredicted RBP15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 DUS3LQ96G46 650 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 FRMD6Q96NE9 622 aa15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 GLIPR2Q9H4G4 154 aa15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 RUBCNLQ9H714 662 aa15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 ADAP2Q9NPF8 381 aa15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 STX18Q9P2W9 335 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 PPIEQ9UNP9 301 aaKnown RBP15.65■□□□□ 0.1
SCAMP4-204ENST00000414057 SPTAN1Q13813 2472 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 SCN2AQ99250 2005 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 NAV2Q8IVL1 2488 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 NBPF19A0A087WUL8 3843 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 TRBV11-1A0A0K0K1C0 115 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 TCRBV3S1A0A5B6 114 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 GLOD5A6NK44 160 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 GSTA4O15217 222 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 NME2P1O60361 137 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 SLC19A2O60779 497 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 HOXB6P17509 224 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 NME2P22392 152 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 SOAT1P35610 550 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 RGNQ15493 299 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 CYP51A1Q16850 503 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 RPTNQ6XPR3 784 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 SPATA24Q86W54 205 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 LRRC25Q8N386 305 aaPredicted RBP15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 TMEM156Q8N614 296 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 POGLUT1Q8NBL1 392 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 APCDD1LQ8NCL9 501 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 DAZLQ92904 295 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 RSRC1Q96IZ7 334 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 ZNF681Q96N22 645 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 HES7Q9BYE0 225 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 CXorf36Q9H7Y0 433 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 GORASP2Q9H8Y8 452 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 S100A14Q9HCY8 104 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 THUMPD1Q9NXG2 353 aaKnown RBP15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 EGFL7Q9UHF1 273 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 KLF13Q9Y2Y9 288 aaPredicted RBP15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 CLCA3PQ9Y6N3 262 aa15.64■□□□□ 0.09
SCAMP4-204ENST00000414057 RNF103-CHMP3A0A140T963 221 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 CTNSO60931 367 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 PRKRAO75569 313 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 KRT36O76013 467 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 ZFAND5O76080 213 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 IFNA16P05015 189 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 UMPSP11172 480 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 ZNF24P17028 368 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 GPC1P35052 558 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 RBBP4Q09028 425 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 STX4Q12846 297 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 HSPB3Q12988 150 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 BIKQ13323 160 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 VEZF1Q14119 521 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 SERTAD2Q14140 314 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 RCN1Q15293 331 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 ELAVL1Q15717 326 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 SAXO2Q658L1 398 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 GLYATQ6IB77 296 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 ZNF551Q7Z340 670 aaPredicted RBP15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 HIPK4Q8NE63 616 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 NSMCE2Q96MF7 247 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 CSF3RQ99062 836 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 SIRT3Q9NTG7 399 aaPredicted RBP15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 SNX8Q9Y5X2 465 aa15.63■□□□□ 0.09
SCAMP4-204ENST00000414057 DOPEY1Q5JWR5 2465 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 NPIPA5E9PKD4 350 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 KLRC4-KLRK1H3BQV0 150 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 HNRNPRO43390 633 aaKnown RBP15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 GPR75O95800 540 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 GPIP06744 558 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 ATP6V1B2P21281 511 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 CCT3P49368 545 aaKnown RBP15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 ST13P50502 369 aaKnown RBP15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 ANXA11P50995 505 aaKnown RBP15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 XKP51811 444 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 SPDYE7PQ495Y7 208 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 ZNF468Q5VIY5 522 aaPredicted RBP15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 SPPL2CQ8IUH8 684 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 SLC30A8Q8IWU4 369 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 EID3Q8N140 333 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 GHDCQ8N2G8 530 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 ZNF808Q8N4W9 903 aaPredicted RBP15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 OR56A1Q8NGH5 318 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 UCN3Q969E3 161 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 TMEM38AQ9H6F2 299 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 C3orf14Q9HBI5 128 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 GMPR2Q9P2T1 348 aaKnown RBP15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 NPIPA1Q9UND3 350 aa15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 YARS2Q9Y2Z4 477 aaKnown RBP15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 KLF2Q9Y5W3 355 aaPredicted RBP15.62■□□□□ 0.09
SCAMP4-204ENST00000414057 PRSS44E7EML9 344 aa15.61■□□□□ 0.09
SCAMP4-204ENST00000414057 ASNA1O43681 348 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms