RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 FUT6P51993 359 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 BACE1P56817 501 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 EWSR1Q01844 656 aaKnown RBP eCLIP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 ZP4Q12836 540 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 TAF13Q15543 124 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 TGFBIQ15582 683 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CHI3L2Q15782 390 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CHRNA6Q15825 494 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 IZUMO4Q1ZYL8 232 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 MTHFSDQ2M296 383 aaKnown RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 FAM74A3Q4VXF1 159 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CELF3Q5SZQ8 465 aaKnown RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 LIN9Q5TKA1 542 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 AGAP7PQ5VUJ5 663 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 LIPNQ5VXI9 398 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 PLCXD3Q63HM9 321 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 TMEM53Q6P2H8 277 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 UQCC3Q6UW78 93 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 KCTD8Q6ZWB6 473 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 FCRLAQ7L513 359 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 RBM23Q86U06 439 aaKnown RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 RANBP3LQ86VV4 465 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 TCAIMQ8N3R3 496 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 GTPBP8Q8N3Z3 284 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 CSGALNACT2Q8N6G5 542 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 KBTBD8Q8NFY9 601 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 SORCS1Q8WY21 1168 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 ADIPOR1Q96A54 375 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 C18orf25Q96B23 403 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 C10orf35Q96D05 121 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 NRBF2Q96F24 287 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 SLC47A1Q96FL8 570 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 C7orf34Q96L11 122 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 PRRC1Q96M27 445 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 AGAP4Q96P64 663 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 PANX2Q96RD6 677 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 RIOK1Q9BRS2 568 aaKnown RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 WACQ9BTA9 647 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 LRRC1Q9BTT6 524 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 TDRD1Q9BXT4 1180 aaKnown RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 FAM49AQ9H0Q0 323 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 RGCCQ9H4X1 137 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 TDRD3Q9H7E2 651 aaKnown RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 DDX31Q9H8H2 851 aaKnown RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 GPN2Q9H9Y4 310 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-204ENST00000412061 KLRF1Q9NZS2 232 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 MAN1B1Q9UKM7 699 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 TBC1D24Q9ULP9 559 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 WIPI2Q9Y4P8 454 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 PCDHGB1Q9Y5G3 927 aa3.95□□□□□ -1.78
BRCA1-204ENST00000412061 PPIAL4EA0A075B759 164 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 A0A087WZ39 114 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 A0A1W2PPI3 338 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 A0A1W2PS18 150 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 SMCO3A2RU48 225 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 HSBP1L1C9JCN9 74 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 TEX46H3BTG2 121 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 EPHB6O15197 1021 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 YKT6O15498 198 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 CTSVO60911 334 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 DFFBO76075 338 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 SORBS2O94875 1100 aaKnown RBP3.94□□□□□ -1.78
BRCA1-204ENST00000412061 OPN1LWP04000 364 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 IGF1P05019 195 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 HSMCR30P0CW71 290 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 ADORA3P0DMS8 318 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 PPIAL4FP0DN26 164 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 PLA2G2AP14555 144 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 ETS2P15036 469 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 TNNI1P19237 187 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 SRMP19623 302 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 U2AF2P26368 475 aaKnown RBP eCLIP3.94□□□□□ -1.78
BRCA1-204ENST00000412061 PPP2R1BP30154 601 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 HNRNPH3P31942 346 aaKnown RBP3.94□□□□□ -1.78
BRCA1-204ENST00000412061 HPCAL1P37235 193 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 FEN1P39748 380 aaKnown RBP3.94□□□□□ -1.78
BRCA1-204ENST00000412061 FHITP49789 147 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 BCAP31P51572 246 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 CDH6P55285 790 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 DCDC1P59894 354 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 XIAPP98170 497 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 BST2Q10589 180 aaKnown RBP3.94□□□□□ -1.78
BRCA1-204ENST00000412061 GAGE5Q13069 117 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 GAGE6Q13070 117 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 FHL1Q13642 323 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 KIR2DS3Q14952 304 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 MICBQ29980 383 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 FAM76BQ5HYJ3 339 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 SIRPB2Q5JXA9 342 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 C1orf189Q5VU69 101 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 TMEM220Q6QAJ8 160 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 PRSS57Q6UWY2 283 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 VITQ6UXI7 678 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.94□□□□□ -1.78
BRCA1-204ENST00000412061 Q71RC1 249 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-204ENST00000412061 DHDDSQ86SQ9 333 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 FAM89BQ8N5H3 189 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 CLDN19Q8N6F1 224 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 OR1F12Q8NHA8 337 aa3.94□□□□□ -1.78
BRCA1-204ENST00000412061 C8orf46Q8TAG6 207 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms