RNA–Protein interactions for RNA: ENST00000410940.1

RNU4-78P-201, Transcript of RNA, U4 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU4-78P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-78P-201ENST00000410940 ROPN1BQ9BZX4 212 aaPredicted RBP3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 TRIM9Q9C026 710 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 HOXD1Q9GZZ0 328 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 DNTTIP1Q9H147 329 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 SLC25A51Q9H1U9 297 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 TMEM185BQ9H7F4 350 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 EVA1AQ9H8M9 152 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 Q9HAA7 133 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 IL1RL2Q9HB29 575 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 LRRC4Q9HBW1 653 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 SLC25A19Q9HC21 320 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 LZTFL1Q9NQ48 299 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 MAN2C1Q9NTJ4 1040 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 ONECUT1Q9UBC0 465 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 EXOSC1Q9Y3B2 195 aaKnown RBP3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 GMPPBQ9Y5P6 360 aa3.3□□□□□ -1.88
RNU4-78P-201ENST00000410940 ATP10AO60312 1499 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 A0A0G2JLW4 131 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 TRBV11-1A0A0K0K1C0 115 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 OR5H15A6NDH6 313 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 FRG2CA6NGY1 282 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 C16orf97H3BN30 126 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 MSH4O15457 936 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 TNFSF12O43508 249 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 UPK3AO75631 287 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 TOMM40O96008 361 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 GPIP06744 558 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 FHP07954 510 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 CCDC172P0C7W6 258 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 PABPC4LP0CB38 370 aaKnown RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 ANXA3P12429 323 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 CYP11B1P15538 503 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 IMPDH1P20839 514 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 EDNRAP25101 427 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 PTBP1P26599 531 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 FCGR2CP31995 323 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 BMI1P35226 326 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 RPL4P36578 427 aaKnown RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 RPL13AP40429 203 aaKnown RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 TSFMP43897 325 aaKnown RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 CDKN1BP46527 198 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 EFNB2P52799 333 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 LBX1P52954 281 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 RPL27P61353 136 aaKnown RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 ITPK1Q13572 414 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 CRMP1Q14194 572 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 EIF2B1Q14232 305 aaKnown RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 FASTKQ14296 549 aaKnown RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 P2RY6Q15077 328 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 CAMK4Q16566 473 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 KRTAP15-1Q3LI76 137 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 CELF3Q5SZQ8 465 aaKnown RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 AGAP7PQ5VUJ5 663 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 BTNL3Q6UXE8 466 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 KDM7AQ6ZMT4 941 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 STOX1Q6ZVD7 989 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 WDR49Q8IV35 697 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 MFSD6LQ8IWD5 586 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 NAGSQ8N159 534 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 ZSCAN4Q8NAM6 433 aaPredicted RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 MNS1Q8NEH6 495 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 BBS1Q8NFJ9 593 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 BEST4Q8NFU0 473 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 MAIP1Q8WWC4 291 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 FCAMRQ8WWV6 532 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 LIPHQ8WWY8 451 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 ART4Q93070 314 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 LRRC39Q96DD0 335 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 SDSLQ96GA7 329 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 CENPKQ9BS16 269 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 FUCA2Q9BTY2 467 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 GPR174Q9BXC1 333 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 DUSP16Q9BY84 665 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 CXXC4Q9H2H0 198 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 LRRN3Q9H3W5 708 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 BICC1Q9H694 974 aaKnown RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 AZI2Q9H6S1 392 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 SUDS3Q9H7L9 328 aaPredicted RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 KCNK13Q9HB14 408 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 CHRAC1Q9NRG0 131 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 DCAF13Q9NV06 445 aaKnown RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 INTS9Q9NV88 658 aaKnown RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 ZNHIT6Q9NWK9 470 aaKnown RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 RCOR3Q9P2K3 495 aaPredicted RBP3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 KLK11Q9UBX7 282 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 LNPEPQ9UIQ6 1025 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 ABCG2Q9UNQ0 655 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 RASD1Q9Y272 281 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 COMMD3-BMI1R4GMX3 469 aa3.29□□□□□ -1.88
RNU4-78P-201ENST00000410940 RPAP1Q9BWH6 1393 aaPredicted RBP3.28□□□□□ -1.88
RNU4-78P-201ENST00000410940 NEDD4P46934 1319 aa3.28□□□□□ -1.88
RNU4-78P-201ENST00000410940 FRMPD4Q14CM0 1322 aa3.28□□□□□ -1.88
RNU4-78P-201ENST00000410940 TRBV7-9A0A0J9YWB2 115 aa3.28□□□□□ -1.88
RNU4-78P-201ENST00000410940 A0A0J9YYE9 177 aa3.28□□□□□ -1.88
RNU4-78P-201ENST00000410940 MSGN1A6NI15 193 aa3.28□□□□□ -1.88
RNU4-78P-201ENST00000410940 SRRM3A6NNA2 597 aaPredicted RBP3.28□□□□□ -1.88
RNU4-78P-201ENST00000410940 RNF212BA8MTL3 300 aa3.28□□□□□ -1.88
RNU4-78P-201ENST00000410940 ZNF879B4DU55 563 aa3.28□□□□□ -1.88
RNU4-78P-201ENST00000410940 TM9SF1O15321 606 aa3.28□□□□□ -1.88
RNU4-78P-201ENST00000410940 ARHGEF9O43307 516 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms