RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 STMND1H3BQB6 276 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 CCRL2O00421 344 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 FPGTO14772 594 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 GYG2O15488 501 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 SPAG7O75391 227 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 NME6O75414 186 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-202ENST00000409915 NKX2-2O95096 273 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 WDPCPO95876 746 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 LIPFP07098 398 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 CAPN1P07384 714 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 SBK2P0C263 348 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ZSCAN5DPP0CG00 497 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ANXA8P13928 327 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 DNASE1P24855 282 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 FOXN2P32314 431 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 PCGF2P35227 344 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ADMP35318 185 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ABCG1P45844 678 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 HOXA1P49639 335 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-202ENST00000409915 AQP4P55087 323 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TPTEP56180 551 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 CARD18P57730 90 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 POLR2LP62875 67 aaKnown RBP4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TIAL1Q01085 375 aaKnown RBP eCLIP4.28□□□□□ -1.721e-7■■■■■ 62.8
SF3B1-202ENST00000409915 TNFRSF17Q02223 184 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TAP2Q03519 686 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TLE3Q04726 772 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 RBPJQ06330 500 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ACSM1Q08AH1 577 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ABRQ12979 859 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 KLF10Q13118 480 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ALKBH1Q13686 389 aaKnown RBP4.28□□□□□ -1.72
SF3B1-202ENST00000409915 CCNIQ14094 377 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 FZD2Q14332 565 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 FGFBP1Q14512 234 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF846Q147U1 533 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 MFSD13AQ14CX5 517 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 SHBQ15464 509 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 PCGF3Q3KNV8 242 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 DNAL1Q4LDG9 190 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 YIF1BQ5BJH7 314 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ZNF648Q5T619 568 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ANXA8L1Q5VT79 327 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TMEM211Q6ICI0 200 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 PRMT9Q6P2P2 845 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 PAPD4Q6PIY7 484 aaKnown RBP4.28□□□□□ -1.72
SF3B1-202ENST00000409915 METAP1DQ6UB28 335 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-202ENST00000409915 Q6ZSR6 202 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TRMT10CQ7L0Y3 403 aaKnown RBP4.28□□□□□ -1.72
SF3B1-202ENST00000409915 CLEC14AQ86T13 490 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 IGFN1Q86VF2 1251 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 CCDC36Q8IYA8 594 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 RBFAQ8N0V3 343 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TCAIMQ8N3R3 496 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 DTX3Q8N9I9 347 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 PSD4Q8NDX1 1056 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 DEFB124Q8NES8 71 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 AKR7LQ8NHP1 331 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 OCC1Q8TAD7 63 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 SLC35B2Q8TB61 432 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ELP5Q8TE02 316 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 CAPSLQ8WWF8 208 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ST6GALNAC6Q969X2 333 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 MARC2Q969Z3 335 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TADA1Q96BN2 335 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ISOC1Q96CN7 298 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 NUS1Q96E22 293 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ARSGQ96EG1 525 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 C14orf79Q96F83 325 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 DTD2Q96FN9 168 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 BSCL2Q96G97 398 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-202ENST00000409915 COQ10AQ96MF6 247 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TSNARE1Q96NA8 513 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 PANX3Q96QZ0 392 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 FMO2Q99518 471 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 NPAS1Q99742 590 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 SSX3Q99909 188 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 H2AFJQ9BTM1 129 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 FSD1LQ9BXM9 530 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 PITPNM3Q9BZ71 974 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TCEAL2Q9H3H9 227 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-202ENST00000409915 NARFLQ9H6Q4 476 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 LRRC4CQ9HCJ2 640 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 DLL4Q9NR61 685 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 SYBUQ9NX95 663 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 PKD2L2Q9NZM6 624 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 EIF3KQ9UBQ5 218 aaKnown RBP4.28□□□□□ -1.72
SF3B1-202ENST00000409915 ZFP69BQ9UJL9 534 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TINAGQ9UJW2 476 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 CDC42EP3Q9UKI2 254 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 EXO1Q9UQ84 846 aaKnown RBP4.28□□□□□ -1.72
SF3B1-202ENST00000409915 RBMX2Q9Y388 322 aaKnown RBP4.28□□□□□ -1.72
SF3B1-202ENST00000409915 UGT2A1Q9Y4X1 527 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 AP4S1Q9Y587 144 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 GMPPBQ9Y5P6 360 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 TMEM131Q92545 1883 aa4.28□□□□□ -1.72
SF3B1-202ENST00000409915 PCM1Q15154 2024 aa4.28□□□□□ -1.73
SF3B1-202ENST00000409915 LRRK1Q38SD2 2015 aa4.28□□□□□ -1.73
SF3B1-202ENST00000409915 TP53BP1Q12888 1972 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms