RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 CAMK2AQ9UQM7 478 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 SLC6A5Q9Y345 797 aa13.23□□□□□ -0.29
NIF3L1-205ENST00000409588 LSM1O15116 133 aaKnown RBP13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 PDPK1O15530 556 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 LYPLA1O75608 230 aaPredicted RBP13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 KCNH1O95259 989 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 HSPA4LO95757 839 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 IL33O95760 270 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 CTSSP25774 331 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 LCN1P31025 176 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 MC3RP41968 323 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 FRKP42685 505 aaPredicted RBP13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 GAS1P54826 345 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 MANFP55145 182 aaKnown RBP13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 GFRA1P56159 465 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 EEFSECP57772 596 aaKnown RBP13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 GAB1Q13480 694 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 UGT3A2Q3SY77 523 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 GLYR1Q49A26 553 aaPredicted RBP13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 ARSKQ6UWY0 536 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 TMEM107Q6UX40 140 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 NPSR1Q6W5P4 371 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 SEM1Q6ZVN7 128 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 YRDCQ86U90 279 aaKnown RBP13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 KIF18BQ86Y91 864 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 LIX1LQ8IVB5 337 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 TRIM42Q8IWZ5 723 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 KIRREL3Q8IZU9 778 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 CDRT4Q8N9R6 151 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 OR2W6PQ8NHA6 318 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 TCP10LQ8TDR4 215 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 HOXB13Q92826 284 aaPredicted RBP13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 PPCDCQ96CD2 204 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 EGLN2Q96KS0 407 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 ZIM3Q96PE6 472 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 PRPF18Q99633 342 aaKnown RBP13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 C12orf65Q9H3J6 166 aaKnown RBP13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 ANKRA2Q9H9E1 313 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 TNFRSF12AQ9NP84 129 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 SERHLQ9NQF3 203 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 FAM120CQ9NX05 1096 aaKnown RBP13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 STOML1Q9UBI4 398 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 EDARQ9UNE0 448 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 MAPRE3Q9UPY8 281 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 PDZD2O15018 2839 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 FBN2P35556 2912 aa13.22□□□□□ -0.29
NIF3L1-205ENST00000409588 ZNF500O60304 480 aaPredicted RBP13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 FADS1O60427 444 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 RCBTB2O95199 551 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 LINC00032P0C843 101 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 GRK2P25098 689 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 TACR1P25103 407 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 EVI2BP34910 448 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 GPC1P35052 558 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 ASCL1P50553 236 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 OCRLQ01968 901 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 C17orf67Q0P5P2 114 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 ZNF155Q12901 538 aaPredicted RBP13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 PDE7AQ13946 482 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 WDR53Q7Z5U6 358 aaPredicted RBP13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 ADGRE4PQ86SQ3 457 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 DDIASQ8IXT1 998 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 TNIP2Q8NFZ5 429 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 RNASE6Q93091 150 aaKnown RBP13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 TRIB1Q96RU8 372 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 TUBB1Q9H4B7 451 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 SSU72Q9NP77 194 aaKnown RBP13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 ATAD3AQ9NVI7 634 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 GIN1Q9NXP7 522 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 SH3BP4Q9P0V3 963 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 PPP4R1LQ9P1A2 415 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 HCFC1P51610 2035 aa13.21□□□□□ -0.29
NIF3L1-205ENST00000409588 CTIFO43310 598 aaKnown RBP13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 ZIC3O60481 467 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 GOSR1O95249 250 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 BPGMP07738 259 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 NGFRP08138 427 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 PEPDP12955 493 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 SDC1P18827 310 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 BMP5P22003 454 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 DPP4P27487 766 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 MAP3K8P41279 467 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 PRR5P85299 388 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 MAD2L1Q13257 205 aaPredicted RBP13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 PRSS53Q2L4Q9 553 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 SMU1Q2TAY7 513 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 ATP6AP1LQ52LC2 224 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 FAM219BQ5XKK7 198 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 DESI1Q6ICB0 168 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 CHMP1BQ7LBR1 199 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 OR4K17Q8NGC6 315 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 OR4N2Q8NGD1 307 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 OR6Y1Q8NGX8 325 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 TWIST2Q8WVJ9 160 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 EFHD2Q96C19 240 aaPredicted RBP13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 ATP6V1HQ9UI12 483 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 DKKL1Q9UK85 242 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 EXPH5Q8NEV8 1989 aa13.2□□□□□ -0.3
NIF3L1-205ENST00000409588 H0Y3Z8 333 aa13.19□□□□□ -0.3
NIF3L1-205ENST00000409588 BIRC5O15392 142 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms