RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 WDTC1Q8N5D0 677 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 EIF4E3Q8N5X7 224 aaKnown RBP5.13□□□□□ -1.59
CLK1-202ENST00000409403 CLDN22Q8N7P3 220 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 OR6M1Q8NGM8 313 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 TWIST2Q8WVJ9 160 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 ZFPM2Q8WW38 1151 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 RXFP2Q8WXD0 754 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 RSC1A1Q92681 617 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 RIT1Q92963 219 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 HGDQ93099 445 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 ISG20Q96AZ6 181 aaKnown RBP5.13□□□□□ -1.59
CLK1-202ENST00000409403 SIPA1Q96FS4 1042 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 C10orf90Q96M02 699 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 QRFPRQ96P65 431 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 GPR78Q96P69 363 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 ACOX2Q99424 681 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 VAT1Q99536 393 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 ZBTB18Q99592 522 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 ZNF251Q9BRH9 671 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 NUDT22Q9BRQ3 303 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 MARVELD1Q9BSK0 173 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 MSTO1Q9BUK6 570 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 PDCD10Q9BUL8 212 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 SNRNP25Q9BV90 132 aaKnown RBP5.13□□□□□ -1.59
CLK1-202ENST00000409403 FN3KQ9H479 309 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 ANKRA2Q9H9E1 313 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 SDHAF2Q9NX18 166 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 CNOT2Q9NZN8 540 aaKnown RBP5.13□□□□□ -1.59
CLK1-202ENST00000409403 COPZ2Q9P299 210 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 MLXQ9UH92 298 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 MGAT4AQ9UM21 535 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 SLC27A6Q9Y2P4 619 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 PKP3Q9Y446 797 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 V9GYQ6 96 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 DOPEY2Q9Y3R5 2298 aa5.13□□□□□ -1.59
CLK1-202ENST00000409403 ZFC3H1O60293 1989 aaKnown RBP5.13□□□□□ -1.59
CLK1-202ENST00000409403 ELOVL7A1L3X0 281 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 A1L4Q6 167 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 MFSD2BA6NFX1 497 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 C2orf74A8MZ97 194 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 INMT-MINDY4F8WBC2 141 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 SGK494L7N484 410 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 LYRM1O43325 122 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 DNPH1O43598 174 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 MPZL2O60487 215 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 DPM1O60762 260 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 C1RP00736 705 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 IL1AP01583 271 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 RHOP08100 348 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 CSF3P09919 207 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 PEPDP12955 493 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 SAT1P21673 171 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 HOXA13P31271 388 aaPredicted RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 SDC2P34741 201 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 OR4D2P58180 307 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 HERVK_113P63132 956 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ERVK-8P63133 956 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 RELQ04864 619 aaPredicted RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 PUDPQ08623 228 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 FGL1Q08830 312 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 EFEMP1Q12805 493 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 LARS2Q15031 903 aaKnown RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 ZMYND11Q15326 602 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ZNF79Q15937 498 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ZNF699Q32M78 642 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 GPR33Q49SQ1 333 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ATP6AP1LQ52LC2 224 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ZNF678Q5SXM1 525 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ATPAF1Q5TC12 328 aaPredicted RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 OR6B2Q6IFH4 312 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 SCYL2Q6P3W7 929 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ERICH5Q6P6B1 374 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ZNF549Q6P9A3 640 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 RHOUQ7L0Q8 258 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 KDELC2Q7Z4H8 507 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 HSD17B13Q7Z5P4 300 aaPredicted RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 ZFAND4Q86XD8 727 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 CCDC36Q8IYA8 594 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 FAM9CQ8IZT9 166 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 CYP4Z2PQ8N1L4 340 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 DNAJC22Q8N4W6 341 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 DENND6BQ8NEG7 585 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 OR1N1Q8NGS0 311 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 OR6S1Q8NH40 331 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 SUN3Q8TAQ9 357 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 FBXO30Q8TB52 745 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 GPR151Q8TDV0 419 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 SETD7Q8WTS6 366 aaKnown RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 HEXDCQ8WVB3 486 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ASB10Q8WXI3 467 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 PYCR2Q96C36 320 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 RBM14Q96PK6 669 aaKnown RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 OR2M2Q96R28 347 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 MCCC1Q96RQ3 725 aaPredicted RBP5.12□□□□□ -1.59
CLK1-202ENST00000409403 NPAS1Q99742 590 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 KCNS3Q9BQ31 491 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ALG8Q9BVK2 526 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ERVK-6Q9BXR3 956 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 ASB7Q9H672 318 aa5.12□□□□□ -1.59
CLK1-202ENST00000409403 SLC52A3Q9NQ40 469 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms