RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 PNLIPRP2P54317 469 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 GFRA1P56159 465 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 CLDN18P56856 261 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 OCRLQ01968 901 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 ACAP2Q15057 778 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 CLEC12BQ2HXU8 276 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 EXOC3L2Q2M3D2 409 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 PRICKLE4Q2TBC4 344 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 PDSS1Q5T2R2 415 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 FRG2Q64ET8 278 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 GTF2IRD2BQ6EKJ0 949 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 SLC48A1Q6P1K1 146 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 VWA1Q6PCB0 445 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 SH2D5Q6ZV89 423 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 CYS1Q717R9 158 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 LARP4Q71RC2 724 aaKnown RBP eCLIP6.99□□□□□ -1.294e-10■□□□□ 10.7
LSM5-202ENST00000409292 FAM214BQ7L5A3 538 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 ISCA2Q86U28 154 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 GTF2IRD2Q86UP8 949 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 SLC35F6Q8N357 371 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 PPM1NQ8N819 430 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 ZNF611Q8N823 705 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 WDSUB1Q8N9V3 476 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 OR52R1Q8NGF1 315 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 TMBIM1Q969X1 311 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 FRG2BQ96QU4 278 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 ATOH8Q96SQ7 321 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 ADOQ96SZ5 270 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 PIGQQ9BRB3 760 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 PINK1Q9BXM7 581 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 OPN3Q9H1Y3 402 aaPredicted RBP6.99□□□□□ -1.29
LSM5-202ENST00000409292 PLAC1Q9HBJ0 212 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 BARX1Q9HBU1 254 aaPredicted RBP6.99□□□□□ -1.29
LSM5-202ENST00000409292 SAYSD1Q9NPB0 183 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 YAE1D1Q9NRH1 226 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 GLRX2Q9NS18 164 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 TAS2R9Q9NYW1 312 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 EHD3Q9NZN3 535 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 CPSF2Q9P2I0 782 aaKnown RBP6.99□□□□□ -1.29
LSM5-202ENST00000409292 SNX6Q9UNH7 406 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 PCDHA9Q9Y5H5 950 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 NCKAP5O14513 1909 aa6.99□□□□□ -1.29
LSM5-202ENST00000409292 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 TCRBV9S1A1TA0A576 114 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 LRRC14BA6NHZ5 514 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 WASHC1A8K0Z3 465 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 HS3ST1O14792 307 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 SEC14L5O43304 696 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 COQ9O75208 318 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 SMIM24O75264 130 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 WISP3O95389 354 aaPredicted RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 TGM6O95932 706 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 C8BP07358 591 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 PABPC4LP0CB38 370 aaKnown RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 IVDP26440 423 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 GPX6P59796 221 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 TRA2BP62995 288 aaKnown RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 FASTKD3Q14CZ7 662 aaKnown RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 EXOSC7Q15024 291 aaKnown RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 ZNHIT3Q15649 155 aaPredicted RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 CHRFAM7AQ494W8 412 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 ANKRD34AQ69YU3 496 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 ZNF474Q6S9Z5 364 aaPredicted RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 BEND4Q6ZU67 534 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 ZNF550Q7Z398 422 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 EXOC3L1Q86VI1 746 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 RNF175Q8N4F7 328 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 ZNF610Q8N9Z0 462 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 L3MBTL4Q8NA19 623 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 STEAP2Q8NFT2 490 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 OR6K3Q8NGY3 331 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 CTHRC1Q96CG8 243 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 SLC35A4Q96G79 324 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 REXO5Q96IC2 774 aaKnown RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 HS6ST2Q96MM7 605 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 SSBP4Q9BWG4 385 aaPredicted RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 HDHD5Q9BXW7 423 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 SHCBP1LQ9BZQ2 653 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 OR10A4Q9H209 315 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 ESRP2Q9H6T0 727 aaKnown RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 NOL11Q9H8H0 719 aaKnown RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 RNF122Q9H9V4 155 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 C3orf14Q9HBI5 128 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 ZNF701Q9NV72 531 aaPredicted RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 FAIMQ9NVQ4 179 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 MAT2BQ9NZL9 334 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 RNF14Q9UBS8 474 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 MCTS1Q9ULC4 181 aaKnown RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 SLC12A4Q9UP95 1085 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 GPR52Q9Y2T5 361 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 GPR55Q9Y2T6 319 aaPredicted RBP6.98□□□□□ -1.29
LSM5-202ENST00000409292 PLLPQ9Y342 182 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 SNX24Q9Y343 169 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 RNF11Q9Y3C5 154 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 AP4B1Q9Y6B7 739 aa6.98□□□□□ -1.29
LSM5-202ENST00000409292 KIAA1549Q9HCM3 1950 aa6.97□□□□□ -1.29
LSM5-202ENST00000409292 MED12LQ86YW9 2145 aa6.97□□□□□ -1.29
LSM5-202ENST00000409292 CCDC151A5D8V7 595 aa6.97□□□□□ -1.29
LSM5-202ENST00000409292 FAM159BA6NKW6 160 aa6.97□□□□□ -1.29
LSM5-202ENST00000409292 H3BML4 177 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms