RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 FN3KQ9H479 309 aa13.24□□□□□ -0.29
DUSP28-202ENST00000405954 GPR39O43194 453 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 GJB3O75712 270 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 C22orf31O95567 290 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 ANXA2P07355 339 aaKnown RBP13.23□□□□□ -0.29
DUSP28-202ENST00000405954 CPEP16870 476 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 SHC1P29353 583 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 DUSP4Q13115 394 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 HECTD3Q5T447 861 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 C9orf57Q5W0N0 161 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 ADAM5Q6NVV9 412 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 NOXRED1Q6NXP6 359 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 FAAP20Q6NZ36 180 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 CEACAM19Q7Z692 300 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 FAM181AQ8N9Y4 354 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 MTMR14Q8NCE2 650 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 FOXJ1Q92949 421 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 PIGQQ9BRB3 760 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 ATG10Q9H0Y0 220 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 SLC38A1Q9H2H9 487 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 RPS10P5Q9NQ39 176 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 ACSS1Q9NUB1 689 aaPredicted RBP13.23□□□□□ -0.29
DUSP28-202ENST00000405954 GFOD1Q9NXC2 390 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 PIN4Q9Y237 131 aaKnown RBP13.23□□□□□ -0.29
DUSP28-202ENST00000405954 UNC80Q8N2C7 3258 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 MEIS3P2A8K0S8 358 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 F5H5P2 479 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 ANXA4P09525 319 aaPredicted RBP13.23□□□□□ -0.29
DUSP28-202ENST00000405954 SELLP14151 372 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 CTPS1P17812 591 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 OR1E1P30953 314 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 GDNFP39905 211 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 OLFML2AQ68BL7 652 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 PLBD1Q6P4A8 553 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 SERPINA13PQ6UXR4 307 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 APOOLQ6UXV4 268 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 LBX2Q6XYB7 198 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 ZNF546Q86UE3 836 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 OR4F15Q8NGB8 312 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 OR5T3Q8NGG3 340 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 CSGALNACT1Q8TDX6 532 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 C3orf49Q96BT1 292 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 C7orf34Q96L11 122 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 ACPTQ9BZG2 426 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 GAREM1Q9H706 876 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 ZNF629Q9UEG4 869 aaPredicted RBP13.23□□□□□ -0.29
DUSP28-202ENST00000405954 CRLS1Q9UJA2 301 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 TRBV4-1A0A0J9YWV2 114 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 SUSD5O60279 629 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 FADS1O60427 444 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 SLC25A14O95258 325 aaPredicted RBP13.23□□□□□ -0.29
DUSP28-202ENST00000405954 RECKO95980 971 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 H1F0P07305 194 aaKnown RBP13.23□□□□□ -0.29
DUSP28-202ENST00000405954 GABRA1P14867 456 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 DGKGP49619 791 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 VEZF1Q14119 521 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 PSAPL1Q6NUJ1 521 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 TNFAIP8L2Q6P589 184 aaPredicted RBP13.23□□□□□ -0.29
DUSP28-202ENST00000405954 USP53Q70EK8 1073 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 TMED4Q7Z7H5 227 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 DDX53Q86TM3 631 aaKnown RBP13.23□□□□□ -0.29
DUSP28-202ENST00000405954 GTPBP8Q8N3Z3 284 aaPredicted RBP13.23□□□□□ -0.29
DUSP28-202ENST00000405954 OR10H4Q8NGA5 316 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 OR51G2Q8NGK0 314 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 ZNF707Q96C28 371 aaPredicted RBP13.23□□□□□ -0.29
DUSP28-202ENST00000405954 CNTNAP3BQ96NU0 1288 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 SLC35A5Q9BS91 424 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 TTTY10Q9BZA0 68 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 ADAMTS5Q9UNA0 930 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 CBY1Q9Y3M2 126 aa13.23□□□□□ -0.29
DUSP28-202ENST00000405954 NUMA1Q14980 2115 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 IRGMA1A4Y4 181 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 C2orf78A6NCI8 922 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 CPSF4LA6NMK7 179 aaKnown RBP13.22□□□□□ -0.29
DUSP28-202ENST00000405954 BNIP3LO60238 219 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 EFCAB14O75071 495 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 GBAP04062 536 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 ACVR1BP36896 505 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 DLX5P56178 289 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 C9orf131Q5VYM1 1079 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 KIAA1211LQ6NV74 962 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 QSOX2Q6ZRP7 698 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 PGAP1Q75T13 922 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 LDLRAD3Q86YD5 345 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 OR10H5Q8NGA6 315 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 IMP4Q96G21 291 aaKnown RBP13.22□□□□□ -0.29
DUSP28-202ENST00000405954 ZFP42Q96MM3 310 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 RDH14Q9HBH5 336 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 FBXL3Q9UKT7 428 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 PAPPA2Q9BXP8 1791 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 ZAR1LA6NP61 321 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 PRICKLE3O43900 615 aaPredicted RBP13.22□□□□□ -0.29
DUSP28-202ENST00000405954 HBP1O60381 514 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 SEMA7AO75326 666 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 SNRPBP14678 240 aaKnown RBP13.22□□□□□ -0.29
DUSP28-202ENST00000405954 PTNP21246 168 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 LPOP22079 712 aaPredicted RBP13.22□□□□□ -0.29
DUSP28-202ENST00000405954 DGKAP23743 735 aa13.22□□□□□ -0.29
DUSP28-202ENST00000405954 RBMS1P29558 406 aaKnown RBP13.22□□□□□ -0.29
DUSP28-202ENST00000405954 MLLT1Q03111 559 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms