RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 GUCA1BQ9UMX6 200 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 LIPT1Q9Y234 373 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 ASB3Q9Y575 518 aa4.23□□□□□ -1.73
HMGB3P19-201ENST00000403971 DENND4AQ7Z401 1863 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 MYO10Q9HD67 2058 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 A0A087WZ39 114 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 MACROD2A1Z1Q3 448 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 ANKDD1BA6NHY2 528 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 MIF4GDA9UHW6 222 aaKnown RBP4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 F8VP50 259 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 SLC33A1O00400 549 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 ADAM12O43184 909 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 HSF2BPO75031 334 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 PROSCO94903 275 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 IGHEP01854 428 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 MT-ND2P03891 347 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 OR4Q2P0C623 313 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 ZDHHC11BP0C7U3 371 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 ZSCAN5DPP0CG00 497 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 KRT3P12035 628 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 MYOGP15173 224 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 DESP17661 470 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 CYP2F1P24903 491 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 HOXA9P31269 272 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 FRKP42685 505 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 SLC1A1P43005 524 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 MAGEB1P43366 347 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 TKTL1P51854 596 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 DAOAP59103 153 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 GNG11P61952 73 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 C17orf67Q0P5P2 114 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 ADIGQ0VDE8 80 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 PLD1Q13393 1074 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 PIGHQ14442 188 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 TAB1Q15750 504 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 CCDC6Q16204 474 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 LRIT3Q3SXY7 679 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 OR6B2Q6IFH4 312 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 DNAJC24Q6P3W2 148 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 DCUN1D2Q6PH85 259 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 SIGLEC15Q6ZMC9 328 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 FAM183BPQ6ZVS7 135 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 ARHGAP18Q8N392 663 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 TMCO5AQ8N6Q1 288 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 WDSUB1Q8N9V3 476 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 ZNF519Q8TB69 540 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 UBLCP1Q8WVY7 318 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 NT5C3BQ969T7 300 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 KCNK16Q96T55 309 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 PRMT1Q99873 361 aaKnown RBP4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 CNPY3Q9BT09 278 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 ZNF350Q9GZX5 532 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 DPEP2Q9H4A9 486 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 UXTQ9UBK9 157 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 TRIM10Q9UDY6 481 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 ANAPC7Q9UJX3 599 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 SCML2Q9UQR0 700 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 EXOGQ9Y2C4 368 aaKnown RBP4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 SELENOKQ9Y6D0 94 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 CSNK1G3Q9Y6M4 447 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 CDH23Q9H251 3354 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 CHD9Q3L8U1 2897 aa4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 KIF26AQ9ULI4 1882 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P19-201ENST00000403971 A0A0A6YYC8 382 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 SMIM30A4D0T7 59 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 SDR42E2A6NKP2 422 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 HIDE1A8MVS5 230 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 GOLGA8SH3BPF8 625 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 I3L1I5 382 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 SLC1A7O00341 560 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 PRRG1O14668 218 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 BUB1O43683 1085 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 FMO6PO60774 539 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 HMGA1P17096 107 aaKnown RBP4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 ATF6P18850 670 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 AADACP22760 399 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 DNAJB1P25685 340 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 CTNNA2P26232 953 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 SRD5A2P31213 254 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 PCK1P35558 622 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 MATKP42679 507 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 IER3P46695 156 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 CLCN4P51793 760 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 ARPP19P56211 112 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 RCN2Q14257 317 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 SLC25A52Q3SY17 297 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 C2CD6Q53TS8 623 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 FGD3Q5JSP0 725 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 CEP85LQ5SZL2 805 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 LRRC38Q5VT99 294 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 CES4AQ5XG92 561 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 STRADAQ7RTN6 431 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 PEX26Q7Z412 305 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 BNIPLQ7Z465 357 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 ITIH5Q86UX2 942 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 NT5DC3Q86UY8 548 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 SLC35F6Q8N357 371 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 LEMD2Q8NC56 503 aa4.21□□□□□ -1.74
HMGB3P19-201ENST00000403971 CKAP2Q8WWK9 683 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms