RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ATP6V1C1P21283 382 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 SHC1P29353 583 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 AXLP30530 894 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 KIF5BP33176 963 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 KRT6CP48668 564 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 STK19P49842 368 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 NOVA1P51513 510 aaKnown RBP3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 NAPAP54920 295 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 KRTAP10-9P60411 292 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 PLOD1Q02809 727 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 SNTB2Q13425 540 aaKnown RBP3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 CCDC57Q2TAC2 916 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 LINC01620Q4KN68 170 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 EIPR1Q53HC9 387 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 VWA2Q5GFL6 755 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 NCR3LG1Q68D85 454 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 CBLN3Q6UW01 205 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 CES3Q6UWW8 571 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 METTL7BQ6UX53 244 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 LANCL3Q6ZV70 420 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 STOX1Q6ZVD7 989 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 PARGQ86W56 976 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 POM121L12Q8N7R1 296 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 FADS6Q8N9I5 356 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 CSNK1G2-AS1Q8NCQ2 148 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 STKLD1Q8NE28 680 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 CNIH3Q8TBE1 160 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 M1APQ8TC57 530 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 THRSPQ92748 146 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 OSTF1Q92882 214 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 ELMO2Q96JJ3 720 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 TTC25Q96NG3 672 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 NAP1L5Q96NT1 182 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 C19orf43Q9BQ61 176 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 ERP44Q9BS26 406 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 TPPP3Q9BW30 176 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 RAB33BQ9H082 229 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 TMEM117Q9H0C3 514 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 SLC25A51Q9H1U9 297 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 EPS15L1Q9UBC2 864 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 SLC2A6Q9UGQ3 507 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 TMCC3Q9ULS5 477 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 DUSP12Q9UNI6 340 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 EXOSC1Q9Y3B2 195 aaKnown RBP3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 AP4B1Q9Y6B7 739 aa3.05□□□□□ -1.92
HMGB1P17-201ENST00000403495 IGHV3OR16-12A0A075B7B8 117 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 ZNF840PA6NDX5 716 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 E9PAM4 449 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 NPIPA2E9PIF3 369 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 E2F3O00716 465 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 NDC80O14777 642 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 MAPK13O15264 365 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 DUX1O43812 170 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 JAK2O60674 1132 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 PRAMEF12O95522 483 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 PIGRP01833 764 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 UMPSP11172 480 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 SOX6P35712 828 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 RPL4P36578 427 aaKnown RBP3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 ACVR1BP36896 505 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 LIM2P55344 173 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 PJVKQ0ZLH3 352 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 IL18R1Q13478 541 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 PEX6Q13608 980 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 ZNF311Q5JNZ3 666 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 CCBE1Q6UXH8 406 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 GSG1LQ6UXU4 331 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 TMUB2Q71RG4 321 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 DPY19L4Q7Z388 723 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 KIAA1328Q86T90 577 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 OR10T2Q8NGX3 314 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 FNDC8Q8TC99 324 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 CCT8L2Q96SF2 557 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 TM2D1Q9BX74 207 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 TEX13BQ9BXU2 312 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 TRIM9Q9C026 710 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 TRIM6Q9C030 488 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 PNNQ9H307 717 aaKnown RBP3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 LPAR2Q9HBW0 351 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 TIGARQ9NQ88 270 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 AATFQ9NY61 560 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 XPO7Q9UIA9 1087 aaKnown RBP3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 BARX2Q9UMQ3 279 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 GON4LQ3T8J9 2241 aa3.04□□□□□ -1.92
HMGB1P17-201ENST00000403495 CCDC7Q96M83 1385 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 SF3B1O75533 1304 aaKnown RBP eCLIP3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 ESYT2A0FGR8 921 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 EFCAB7A8K855 629 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 XPO1O14980 1071 aaKnown RBP3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 STX7O15400 261 aaKnown RBP3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 SRPX2O60687 465 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 SH3BGRLO75368 114 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 RHBDL1O75783 438 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 UFL1O94874 794 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 CHRNA1P02708 482 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 CSF2P04141 144 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 FAM200BP0CF97 657 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 SLC35E2P0CK97 266 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 UQCRBP14927 111 aa3.03□□□□□ -1.92
HMGB1P17-201ENST00000403495 SDC1P18827 310 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms